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SCNpilot_cont_300_bf_scaffold_3446

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3446_1
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..307)
DNA (306bp) protein (102aa)
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
DNA-directed RNA polymerase beta' chain (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QDC9_BREDI
SCNpilot_cont_300_bf_scaffold_3446_2
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(414..626)
DNA (213bp) protein (71aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Caulobacter sp. AP07 RepID=J2H6E5_9CAUL
SCNpilot_cont_300_bf_scaffold_3446_3
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(569..2440)
DNA (1872bp) protein (624aa)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=RPOB_PHEZH
rpoB; DNA-directed RNA polymerase subunit beta
SCNpilot_cont_300_bf_scaffold_3446_4
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2916..4319)
DNA (1404bp) protein (468aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI0003665D26
SCNpilot_cont_300_bf_scaffold_3446_5
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4705..6621
DNA (1917bp) protein (639aa)
Predicted protease with the C-terminal PDZ domain n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAH4_PHEZH rbh
protease with the C-terminal PDZ domain Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
protease with the C-terminal PDZ domain
SCNpilot_cont_300_bf_scaffold_3446_6
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6709..7146
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQW3_AZOBR
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3446_7
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7377..9023
DNA (1647bp) protein (549aa)
Permease of the major facilitator superfamily n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RD99_PHEZH rbh
major facilitator superfamily permease
Permease of the major facilitator superfamily {ECO:0000313|EMBL:ACG76703.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;"
SCNpilot_cont_300_bf_scaffold_3446_8
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9127..10020)
DNA (894bp) protein (298aa)
siroheme synthase n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00037BAC4E rbh
siroheme synthase
Siroheme synthase {ECO:0000313|EMBL:ABZ69186.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain
SCNpilot_cont_300_bf_scaffold_3446_9
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10622..11440
DNA (819bp) protein (273aa)
Aldo/keto reductase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T231_CAUSK rbh
bifunctional regulator KidO
Aldo/keto reductase {ECO:0000313|EMBL:ABZ69200.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strai
SCNpilot_cont_300_bf_scaffold_3446_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11475..12263
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVE4_BREDI rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96573.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevund
putative permease
SCNpilot_cont_300_bf_scaffold_3446_11

Not on your lists

12456..13394
DNA (939bp) protein (313aa)
Putative NHL repeat protein n=1 Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1G1_9ZZZZ rbh
Putative NHL repeat protein {ECO:0000313|EMBL:ABZ06420.1}; TaxID=455516 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_009L19.;"
hypothetical protein
Displaying 11 items

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