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SCNpilot_cont_300_bf_scaffold_3582

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3582_1
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..101
DNA (99bp) protein (33aa)
Pseudoazurin {ECO:0000313|EMBL:EMG53012.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
SCNpilot_cont_300_bf_scaffold_3582_2
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(539..2026)
DNA (1488bp) protein (496aa)
Major facilitator superfamily MFS 1 n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UHG9_9RHIZ
Major facilitator superfamily MFS 1 {ECO:0000313|EMBL:ENN89698.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizob
major facilitator superfamily transporter
SCNpilot_cont_300_bf_scaffold_3582_3
unknown

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comp(2182..2349)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3582_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2660..3355
DNA (696bp) protein (232aa)
Two-component transcriptional regulator n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVC0_RHITR
two-component transcriptional regulator
Two-component transcriptional regulator {ECO:0000313|EMBL:AGB74089.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rh
SCNpilot_cont_300_bf_scaffold_3582_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3294..4394
DNA (1101bp) protein (367aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobiu
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VF31_9RHIZ
integral membrane sensor signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_3582_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4565..5377
DNA (813bp) protein (271aa)
Transcriptional regulator of sugar metabolism n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRF0_9RHIZ rbh
Transcriptional regulator of sugar metabolism {ECO:0000313|EMBL:EYR78656.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinel
deoR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3582_7
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5400..5900
DNA (501bp) protein (167aa)
GCN5-related N-acetyltransferase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FAC4_9RHIZ
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CCV13380.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
N-acetyltransferase GCN5
SCNpilot_cont_300_bf_scaffold_3582_8
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5959..6072)
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TWW0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN84914.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3582_9
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6209..7108)
DNA (900bp) protein (300aa)
Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JLB4_AGRRK rbh
transcriptional regulator
Transcriptional regulator protein {ECO:0000313|EMBL:ACM28613.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobact
SCNpilot_cont_300_bf_scaffold_3582_10
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7244..8539
DNA (1296bp) protein (432aa)
Glycine/D-amino acid oxidase, deaminating n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0JVR8_RHILV
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:EJC68574.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
FAD dependent oxidoreductase
SCNpilot_cont_300_bf_scaffold_3582_11
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8587..10125
DNA (1539bp) protein (513aa)
NAD-dependent aldehyde dehydrogenase n=1 Tax=Rhizobium sp. CF122 RepID=J2IYU8_9RHIZ
aldehyde dehydrogenase protein
Aldehyde dehydrogenase protein {ECO:0000313|EMBL:AJD43204.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
SCNpilot_cont_300_bf_scaffold_3582_12
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10209..10592)
DNA (384bp) protein (128aa)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (EC:4.4.1.5)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HV10_9FIRM
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily {ECO:0000313|EMBL:CCY33530.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; en
SCNpilot_cont_300_bf_scaffold_3582_13
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10719..12500)
DNA (1782bp) protein (594aa)
ABC transporter ATP-binding protein yliA n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U3U8_9RHIZ rbh
ABC transporter ATP-binding protein yliA {ECO:0000313|EMBL:ENN84978.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; R
putative peptide transport fused subunits of ABC superfamily: ATP-binding components
SCNpilot_cont_300_bf_scaffold_3582_14
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12503..13342)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWM5_9RHIZ rbh
ABC-type dipeptide/oligopeptide/nickel transport system permease component {ECO:0000313|EMBL:EYR84428.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiacea
peptide ABC transporter
Displaying 14 items

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