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SCNpilot_cont_300_bf_scaffold_3656

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3656_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..195
DNA (195bp) protein (65aa)
Transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZY7_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EYR81550.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_cont_300_bf_scaffold_3656_2
Pseudomonas fuscovaginae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(119..979)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Pseudomonas fuscovaginae RepID=UPI000369109A
SCNpilot_cont_300_bf_scaffold_3656_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1226..1654
DNA (429bp) protein (143aa)
Sarcosine oxidase subunit beta {ECO:0000313|EMBL:EYR81549.1}; EC=1.5.3.1 {ECO:0000313|EMBL:EYR81549.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae
Sarcosine oxidase subunit beta n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CJW5_9RHIZ
sarcosine oxidase subunit beta
SCNpilot_cont_300_bf_scaffold_3656_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1664..1948
DNA (285bp) protein (95aa)
Sarcosine oxidase delta subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5F030_9RHIZ
Sarcosine oxidase delta subunit {ECO:0000313|EMBL:EYR81548.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
sarcosine oxidase subunit delta family protein
SCNpilot_cont_300_bf_scaffold_3656_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1929..4736
DNA (2808bp) protein (936aa)
Sarcosine oxidase subunit alpha {ECO:0000313|EMBL:EYR81547.1}; EC=1.5.3.1 {ECO:0000313|EMBL:EYR81547.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiacea
Sarcosine oxidase subunit alpha n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4C7_9RHIZ rbh
sarcosine oxidase subunit alpha family protein
SCNpilot_cont_300_bf_scaffold_3656_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4729..5274
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D8P8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81546.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3656_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5336..6451
DNA (1116bp) protein (372aa)
Leu/Ile/Val-binding protein 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZZ2_9RHIZ rbh
ABC-type branched-chain amino acid transport system periplasmic component {ECO:0000313|EMBL:EYR81545.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae
extracellular ligand-binding receptor
SCNpilot_cont_300_bf_scaffold_3656_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6536..7246)
DNA (711bp) protein (237aa)
L-threonine dehydratase catabolic TdcB {ECO:0000313|EMBL:EYR77399.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EYR77399.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhi
L-threonine dehydratase catabolic TdcB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX21_9RHIZ
pyridoxal-5'-phosphate-dependent protein subunit beta
Displaying 8 items

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