name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_1129_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..273
|
hydroxymethylglutaryl-CoA lyase n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI0003687DAC
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:EMS95195.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacte
hmgL; hydroxymethylglutaryl-CoA lyase
|
|
SCNpilot_cont_300_bf_scaffold_1129_2
Agrobacterium fabrum, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
270..1040
|
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=Q7CSK7_AGRT5
rbh
enoyl-CoA hydratase
rbh
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:AAK89913.2}; TaxID=176299 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium grou
|
|
SCNpilot_cont_300_bf_scaffold_1129_3
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1157..2614
|
PAS sensor protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000361C4E3
putative response regulator/GGDEF domain transcriptional regulator
Putative response regulator/GGDEF domain transcriptional regulator {ECO:0000313|EMBL:AHK45340.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinor
|
|
SCNpilot_cont_300_bf_scaffold_1129_4
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2621..3013)
|
Endoribonuclease L-PSP n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X420_OCHA4
endoribonuclease L-PSP family protein
Endoribonuclease L-PSP {ECO:0000313|EMBL:ABS15974.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (str
|
|
SCNpilot_cont_300_bf_scaffold_1129_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3113..4159)
|
3-carboxy-cis,cis-muconate cycloisomerase (EC:5.5.1.2)
PREDICTED: uncharacterized protein C8E4.05c-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C18C28
rbh
3-carboxy-cis,cis-muconate cycloisomerase {ECO:0000313|EMBL:EPR19410.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
|
|
SCNpilot_cont_300_bf_scaffold_1129_6
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4168..4788)
|
Protocatechuate 3,4-dioxygenase, alpha subunit n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HCE9_RHIRD
rbh
pcaG; protocatechuate 3,4-dioxygenase alpha subunit
rbh
Protocatechuate 3,4-dioxygenase {ECO:0000313|EMBL:KJF67236.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium
|
|
SCNpilot_cont_300_bf_scaffold_1129_7
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4788..5090)
|
Protocatechuate 3,4-dioxygenase beta chain {ECO:0000313|EMBL:CCF21469.1}; EC=1.13.11.3 {ECO:0000313|EMBL:CCF21469.1};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rh
Protocatechuate 3,4-dioxygenase beta chain n=1 Tax=Rhizobium sp. RepID=L0NKN4_RHISP
pcaH; protocatechuate 3,4-dioxygenase beta subunit
|
|
SCNpilot_cont_300_bf_scaffold_1129_8
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5499..5903)
|
4-carboxymuconolactone decarboxylase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K2N0_AGRVS
pcaC; 4-carboxymuconolactone decarboxylase
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ACM39128.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrob
|
|
SCNpilot_cont_300_bf_scaffold_1129_9
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5908..6429)
|
3-oxoadipate enol-lactonase n=1 Tax=Rhizobium radiobacter RepID=UPI00036A56CD
3-oxoadipate enol-lactonase {ECO:0000313|EMBL:EPR19414.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium
pcaD; beta-ketoadipate enol-lactone hydrolase
|
|
SCNpilot_cont_300_bf_scaffold_1129_10
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6681..7841)
|
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K2M7_AGRVS
rbh
pobA; 4-hydroxybenzoate 3-monooxygenase
rbh
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:ACM39125.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobact
|
|
SCNpilot_cont_300_bf_scaffold_1129_11
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7958..8836
|
DNA-binding domain-containing protein, AraC-type n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q8C0_9RHIZ
rbh
DNA-binding domain-containing protein, AraC-type
rbh
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:CDI10006.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
|
|
SCNpilot_cont_300_bf_scaffold_1129_12
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8895..9659)
|
short chain dehydrogenase (EC:1.1.1.100)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037D30A4
rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KGJ04642.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus haloph
|
|
SCNpilot_cont_300_bf_scaffold_1129_13
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9663..10709)
|
fuconate dehydratase n=1 Tax=Meganema perideroedes RepID=UPI00037FFC46
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EIM77467.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_1129_14
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10870..11712)
|
ureidoglycolate lyase n=1 Tax=Pannonibacter phragmitetus RepID=UPI00037903B6
rbh
fumarylacetoacetate (FAA) hydrolase family protein
Tax=BJP_IG2158_Rhodobacterales_69_12
|
|
SCNpilot_cont_300_bf_scaffold_1129_15
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11766..12710)
|
LacI family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI000369D647
rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:KGJ16649.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Para
sugar ABC transporter substrate-binding protein
rbh
|
|
SCNpilot_cont_300_bf_scaffold_1129_16
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12754..13767)
|
ribose ABC transporter permease n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036086E6
rbh
Ribose ABC transporter permease {ECO:0000313|EMBL:KGJ04644.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus
sugar ABC transporter permease
|
|
SCNpilot_cont_300_bf_scaffold_1129_17
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13793..14116)
|
Monosaccharide-transporting ATPase {ECO:0000256|SAAS:SAAS00041637}; EC=3.6.3.17 {ECO:0000256|SAAS:SAAS00041637};; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
ABC sugar transporter, ATPase subunit protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CIL9_9RHOB
sugar ABC transporter ATPase
|
|
SCNpilot_cont_300_bf_scaffold_1129_18
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14146..16065)
|
Monosaccharide-transporting ATPase {ECO:0000256|SAAS:SAAS00041637}; EC=3.6.3.17 {ECO:0000256|SAAS:SAAS00041637};; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
ABC sugar transporter, ATPase subunit protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CIL9_9RHOB
rbh
sugar ABC transporter ATPase
|
|
SCNpilot_cont_300_bf_scaffold_1129_19
Paracoccus sp. 10990, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16100..16837)
|
oxidoreductase n=1 Tax=Meganema perideroedes RepID=UPI000372B081
rbh
Oxidoreductase {ECO:0000313|EMBL:KGJ19524.1}; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 10990.;"
short-chain dehydrogenase/reductase SDR
|
|
SCNpilot_cont_300_bf_scaffold_1129_20
Paracoccus sp. 10990, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16970..17797
|
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00037882F2
rbh
IclR family transcriptional regulator {ECO:0000313|EMBL:KGJ19525.1}; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Para
IclR family transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_1129_21
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17852..18076
|
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZU05_RHILW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI55564.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
|
|
SCNpilot_cont_300_bf_scaffold_1129_22
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18243..18851
|
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000370F04F
rbh
Uncharacterized protein {ECO:0000313|EMBL:ESX59772.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
YKOF-like protein
|
|
SCNpilot_cont_300_bf_scaffold_1129_23
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18882..19691
|
UPI0003CF8BE9 related cluster n=1 Tax=unknown RepID=UPI0003CF8BE9
Uncharacterized protein {ECO:0000313|EMBL:KKB86674.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
binding-protein-dependent transport systems inner membrane component
|
|
SCNpilot_cont_300_bf_scaffold_1129_24
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19688..20446
|
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003707548
rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB06902.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geoje
ABC transporter
|
|
SCNpilot_cont_300_bf_scaffold_1129_25
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20446..21456
|
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003742884
rbh
GGDEF domain protein {ECO:0000313|EMBL:KFC71284.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
NMT1/THI5 like domain-containing protein
|
|
SCNpilot_cont_300_bf_scaffold_1129_26
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21529..21705
|
Uncharacterized protein {ECO:0000313|EMBL:CAC48617.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" sou
|
|
SCNpilot_cont_300_bf_scaffold_1129_27
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21897..24245
|
Glucose dehydrogenase {ECO:0000313|EMBL:KGD95026.1}; EC=1.1.5.2 {ECO:0000313|EMBL:KGD95026.1};; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobi
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family n=1 Tax=Rhizobium sp. CF080 RepID=J2R091_9RHIZ
rbh
Glucose dehydrogenase
rbh
|
|
SCNpilot_cont_300_bf_scaffold_1129_28
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24493..24951)
|
signal peptide protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00035D1C4B
Uncharacterized protein {ECO:0000313|EMBL:EJJ29214.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group
RTX toxin hemolysin-type calcium-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_1129_29
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24993..25343)
|
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037FFDA1
Ribosomal protein P2
Ribosomal protein P2 {ECO:0000313|EMBL:CDN54976.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="
|
|
SCNpilot_cont_300_bf_scaffold_1129_30
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25531..26226
|
GntR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETA8_9RHIZ
rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EYR80304.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. D
Transcriptional regulator
|