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SCNpilot_cont_300_bf_scaffold_1164

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1164_1
Rhizobium lupini, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1614
DNA (1614bp) protein (538aa)
rkpK; UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) n=2 Tax=Rhizobium RepID=U4QBJ5_9RHIZ
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:EKJ96261.1}; TaxID=1229491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
SCNpilot_cont_300_bf_scaffold_1164_2
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2182..3459
DNA (1278bp) protein (426aa)
Hemolysin n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=Q7CT66_AGRT5 rbh
Putative signal transduction protein with CBS domain containing protein {ECO:0000313|EMBL:EUB97180.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae;
hemolysin
SCNpilot_cont_300_bf_scaffold_1164_3
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3717..4595)
DNA (879bp) protein (293aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Rhizobium sp. CF142 RepID=J2LAX4_9RHIZ rbh
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:EJJ30219.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae;
DMT superfamily inner membrane transporter protein
SCNpilot_cont_300_bf_scaffold_1164_4
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4778..6073
DNA (1296bp) protein (432aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase n=2 Tax=Rhizobium/Agrobacterium group RepID=PURA_AGRRK
purA; adenylosuccinate synthetase
SCNpilot_cont_300_bf_scaffold_1164_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6139..8553
DNA (2415bp) protein (805aa)
membrane protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003783556 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI56355.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_1164_6
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8568..9023
DNA (456bp) protein (152aa)
GNAT family acetyltransferase n=1 Tax=Pseudomonas syringae pv. syringae B64 RepID=L8NE34_PSESY
Acetyltransferase {ECO:0000313|EMBL:EWY36952.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiires
N-acetyltransferase GCN5
SCNpilot_cont_300_bf_scaffold_1164_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9100..10008)
DNA (909bp) protein (303aa)
RNA polymerase sigma factor RpoH n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LPZ4_RHITR
rpoH1; alternative sigma factor RpoH1
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteri
SCNpilot_cont_300_bf_scaffold_1164_8
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10198..10896)
DNA (699bp) protein (233aa)
Helix-turn-helix type 11 domain protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6U714_SINMW
Uncharacterized protein {ECO:0000313|EMBL:KGD99896.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
helix-turn-helix domain-containing protein
SCNpilot_cont_300_bf_scaffold_1164_9
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11008..11907
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FBA2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGD99897.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1164_10
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11897..12919)
DNA (1023bp) protein (341aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizo
Pseudouridine synthase n=1 Tax=Rhizobium sp. CF080 RepID=J3AT31_9RHIZ rbh
Pseudouridylate synthase
SCNpilot_cont_300_bf_scaffold_1164_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13038..13427
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX46_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR80835.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1164_12
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13433..14254
DNA (822bp) protein (274aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZMS3_RHILW
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ACI56351.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobi
SCNpilot_cont_300_bf_scaffold_1164_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14262..15410)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQ19_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB72170.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_1164_14
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15531..16118)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LPY8_RHITR
Uncharacterized protein {ECO:0000313|EMBL:KGD99902.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1164_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16354..17016
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLB4_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB72168.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_1164_16
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17196..17558
DNA (363bp) protein (121aa)
Response regulator containing a CheY-like receiver domain and an HD-GYP domain n=1 Tax=Rhizobium sp. CF080 RepID=J2HYZ7_9RHIZ
Response regulator receiver protein {ECO:0000313|EMBL:EUB97429.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
Putative 2-component receiver domain protein
SCNpilot_cont_300_bf_scaffold_1164_17
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17718..17978)
DNA (261bp) protein (87aa)
Two component response regulator n=2 Tax=Rhizobium fredii RepID=G9ABD0_RHIFH
two component response regulator
Two component response regulator {ECO:0000313|EMBL:ACP26506.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
SCNpilot_cont_300_bf_scaffold_1164_18
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17969..18358)
DNA (390bp) protein (130aa)
Two component transcriptional regulator / cell cycle transcriptional regulator CtrA n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LI77_9RHIZ
two component response regulator
Cell cycle transcriptional regulator CtrA {ECO:0000313|EMBL:KFB09427.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source
SCNpilot_cont_300_bf_scaffold_1164_19
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18800..19150
DNA (351bp) protein (117aa)
Yypothetical protein n=1 Tax=Rhizobium sp. RepID=L0NHD1_RHISP
Yypothetical protein {ECO:0000313|EMBL:CCF20279.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhi
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1164_20
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19312..19590)
DNA (279bp) protein (93aa)
acetyltransferase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003690CD6
Putative acetyltransferase {ECO:0000313|EMBL:EJJ30233.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" s
putative acetyltransferase
SCNpilot_cont_300_bf_scaffold_1164_21
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19729..20004)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00035E6E1B
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEQ09643.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
SCNpilot_cont_300_bf_scaffold_1164_22
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20418..21119
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HEV6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EPE97289.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
avhR; Transcriptional activator protein luxR
SCNpilot_cont_300_bf_scaffold_1164_23
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21159..21791)
DNA (633bp) protein (211aa)
Glycosyl transferase possibly involved in lipopolysaccharide synthesis n=1 Tax=Rhizobium sp. CF142 RepID=J2L8D4_9RHIZ
Glycosyl transferase possibly involved in lipopolysaccharide synthesis {ECO:0000313|EMBL:EJJ29772.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; R
pssA2; exopolysaccharide production protein
SCNpilot_cont_300_bf_scaffold_1164_24
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21933..22973)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8A648_RHIRD rbh
Uncharacterized protein {ECO:0000313|EMBL:EMS96404.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Ag
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1164_25
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23108..23881)
DNA (774bp) protein (258aa)
cysQ-1; 3'(2'),5'-bisphosphate nucleotidase 1 (EC:3.1.3.7)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000370647B
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:EUB94841.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
SCNpilot_cont_300_bf_scaffold_1164_26
unknown

Not on your lists

23890..24474
DNA (585bp) protein (195aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1164_27
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24892..25377
DNA (486bp) protein (162aa)
Sarcosine oxidase subunit beta n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QXV9_9RHIZ
Sarcosine oxidase subunit beta {ECO:0000313|EMBL:EKF60277.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacter
sarcosine oxidase subunit beta
SCNpilot_cont_300_bf_scaffold_1164_28
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25455..25733
DNA (279bp) protein (93aa)
Sarcosine oxidase subunit delta {ECO:0000313|EMBL:EYR80873.1}; EC=1.5.3.1 {ECO:0000313|EMBL:EYR80873.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiacea
Sarcosine oxidase subunit delta n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CJ83_9RHIZ
Sarcosine oxidase delta subunit
SCNpilot_cont_300_bf_scaffold_1164_29
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25730..26434
DNA (705bp) protein (235aa)
Putative sarcosine oxidase alpha subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V9J6_9RHIZ
Putative sarcosine oxidase alpha subunit {ECO:0000313|EMBL:ENN89881.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; R
soxAe; sarcosine oxidase subunit alpha
SCNpilot_cont_300_bf_scaffold_1164_30
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26403..28649
DNA (2247bp) protein (749aa)
Sarcosine oxidase, alpha subunit family n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FBC0_9RHIZ
Sarcosine oxidase, alpha subunit family {ECO:0000313|EMBL:EHS49895.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; R
Sarcosine oxidase alpha subunit
Displaying items 1-30 of 52 in total

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