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SCNpilot_cont_300_bf_scaffold_1224

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1224_1
unknown

Not on your lists

comp(3..158)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1224_2
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(209..1189)
DNA (981bp) protein (327aa)
Cobalamin biosynthesis protein CobD n=1 Tax=Rhizobium sp. CF142 RepID=J1TFM2_9RHIZ
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agr
cobD; cobalamin biosynthesis protein CobD
SCNpilot_cont_300_bf_scaffold_1224_3
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1290..2288)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035E432D rbh
L-threonine-O-3-phosphate decarboxylase {ECO:0000313|EMBL:EJJ30700.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agr
cobC; pyridoxal-phosphate-dependent aminotransferase (cobalamin biosynthesis protein)
SCNpilot_cont_300_bf_scaffold_1224_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2285..3589)
DNA (1305bp) protein (435aa)
Hydrogenobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.9 {ECO:0000256|HAMAP-Rule:MF_00027};; Hydrogenobyrinic acid a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; T
Cobyrinic acid A,C-diamide synthase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLA8_RHITR
cobB; cobyrinic Acid a,c-diamide synthase
SCNpilot_cont_300_bf_scaffold_1224_5
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3586..4479)
DNA (894bp) protein (298aa)
Uroporphyrin-III C-methyltransferase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QWL1_9RHIZ rbh
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:EKF59727.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agro
cobA; uroporphyrin-III C-methyltransferase
SCNpilot_cont_300_bf_scaffold_1224_6
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4676..5638)
DNA (963bp) protein (321aa)
nucleoside hydrolase n=1 Tax=Rhizobium radiobacter RepID=UPI000362279D rbh
Nucleoside hydrolase {ECO:0000313|EMBL:KJF65167.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source=
iunH; inosine-uridine preferring nucleoside hydrolase
SCNpilot_cont_300_bf_scaffold_1224_7
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5740..6159)
DNA (420bp) protein (140aa)
precorrin methylase n=1 Tax=Rhizobium leguminosarum RepID=UPI00036E5BD6
cobalamin biosynthesis protein
Precorrin-3B C17-methyltransferase {ECO:0000313|EMBL:EKF57188.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agroba
SCNpilot_cont_300_bf_scaffold_1224_8
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6288..7073
DNA (786bp) protein (262aa)
membrane protein n=1 Tax=Rhizobium giardinii RepID=UPI0003702863 rbh
Uncharacterized protein {ECO:0000313|EMBL:EHS51909.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1224_9
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7070..7495)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UAB2_SINMW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR60592.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; S
SCNpilot_cont_300_bf_scaffold_1224_10
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7495..8124)
DNA (630bp) protein (210aa)
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:CDM57778.1}; EC=2.5.1.17 {ECO:0000313|EMBL:CDM57778.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizob
Cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HZ21_9RHIZ
SCNpilot_cont_300_bf_scaffold_1224_11
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8204..10723)
DNA (2520bp) protein (840aa)
Cobaltochelatase, CobN subunit n=1 Tax=Rhizobium sp. CF122 RepID=J3BV07_9RHIZ rbh
Cobaltochelatase, CobN subunit {ECO:0000313|EMBL:EJL58224.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
cobN; cobaltochelatase subunit CobN
SCNpilot_cont_300_bf_scaffold_1224_12
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10686..11876)
DNA (1191bp) protein (397aa)
Cobaltochelatase, CobN subunit n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JGC9_AGRRK
cobN; cobaltochelatase subunit CobN
Cobalamin biosynthesis protein CobN {ECO:0000313|EMBL:GAJ90992.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrob
SCNpilot_cont_300_bf_scaffold_1224_13
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11890..12933)
DNA (1044bp) protein (348aa)
CobW n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003688F10
cobW; cobalamin biosynthesis protein CobW
Cobalamin biosynthesis protein CobW {ECO:0000313|EMBL:ACM26905.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agroba
SCNpilot_cont_300_bf_scaffold_1224_14
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12938..13477)
DNA (540bp) protein (180aa)
cobP; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase (EC:2.7.1.156 2.7.7.62)
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase n=1 Tax=Rhizobium sp. CF080 RepID=J3CF96_9RHIZ
Cobalamin biosynthesis protein {ECO:0000313|EMBL:KGE00670.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
SCNpilot_cont_300_bf_scaffold_1224_15
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14119..15573)
DNA (1455bp) protein (485aa)
Cobyric acid synthase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A7M0_RHIFH rbh
cobQ; protein CobQ rbh
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/E
SCNpilot_cont_300_bf_scaffold_1224_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15817..15960
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN59_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71510.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_1224_17
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16739..17734
DNA (996bp) protein (332aa)
Glycine/betaine ABC transporter substrate-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EEU2_9RHIZ rbh
ABC-type glycine betaine transport, periplasmic subunit {ECO:0000313|EMBL:EHS49780.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiacea
putative substrate-binding component of ABC transporter
SCNpilot_cont_300_bf_scaffold_1224_18
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17965..18876
DNA (912bp) protein (304aa)
ABC-type proline/glycine betaine transport system, permease component n=1 Tax=Rhizobium sp. AP16 RepID=J2WHG5_9RHIZ
ABC-type proline/glycine betaine transport system, permease component {ECO:0000313|EMBL:EJK82120.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rh
QAT familiy ABC transporter, permease protein
SCNpilot_cont_300_bf_scaffold_1224_19
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18869..19915
DNA (1047bp) protein (349aa)
Glycine betaine/L-proline ABC transporter, ATPase subunit n=8 Tax=Rhizobium meliloti RepID=F6BPB8_SINMB rbh
Putative ABC-transporter ATP-binding protein
Putative ABC-transporter ATP-binding protein {ECO:0000313|EMBL:AEH78639.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
SCNpilot_cont_300_bf_scaffold_1224_20
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20052..21068
DNA (1017bp) protein (339aa)
Cobalamin-dependent methionine synthase I n=1 Tax=Rhizobium sp. AP16 RepID=J2DH45_9RHIZ
Cobalamin-dependent methionine synthase I {ECO:0000313|EMBL:EJK82122.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
metH; methionine synthase I
SCNpilot_cont_300_bf_scaffold_1224_21
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21150..22883
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JX74_AGRVS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM36852.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" s
SCNpilot_cont_300_bf_scaffold_1224_22
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22906..23295
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J2LC79_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:GAK69449.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1224_23
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23297..24046)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V197_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN87630.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1224_24
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24186..24863)
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G280_RHIML rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK76571.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizob
Ferredoxin rbh
SCNpilot_cont_300_bf_scaffold_1224_25
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24965..26035)
DNA (1071bp) protein (357aa)
Trimethylamine methyltransferase n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F1A7_9RHIZ
Trimethylamine methyltransferase {ECO:0000313|EMBL:EHS53529.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobiu
trimethylamine methyltransferase
SCNpilot_cont_300_bf_scaffold_1224_26
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26863..27564
DNA (702bp) protein (234aa)
Dimethylamine corrinoid protein MtbC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EUF4_9RHIZ rbh
Dimethylamine corrinoid protein MtbC {ECO:0000313|EMBL:EYR77804.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD
dimethylamine corrinoid protein
SCNpilot_cont_300_bf_scaffold_1224_27
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27619..27780)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NFR3_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF19714.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="
entericidin
SCNpilot_cont_300_bf_scaffold_1224_28
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27798..28454
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1Q4_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR77806.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_1224_29
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28544..29332
DNA (789bp) protein (263aa)
Methionyl-tRNA formyltransferase n=1 Tax=Rhizobium sp. CF080 RepID=J3AW50_9RHIZ rbh
Formyl transferase {ECO:0000313|EMBL:KGE00680.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="R
Formyl transferase domain protein
SCNpilot_cont_300_bf_scaffold_1224_30
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29432..29734
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037116D0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE96269.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
Displaying items 1-30 of 34 in total

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