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SCNpilot_cont_300_bf_scaffold_1241

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1241_1
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..156)
DNA (156bp) protein (52aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteri
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D857_9RHIZ
SCNpilot_cont_300_bf_scaffold_1241_2
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(386..1003)
DNA (618bp) protein (206aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q0T7_9RHIZ rbh
ruvA; Holliday junction DNA helicase ruvA
SCNpilot_cont_300_bf_scaffold_1241_3
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1043..1570)
DNA (528bp) protein (176aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Rhizobium sp. AP16 RepID=J2WB01_9RHIZ
ruvC; Holliday junction resolvase
SCNpilot_cont_300_bf_scaffold_1241_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1722..3989
DNA (2268bp) protein (756aa)
methyl-accepting chemotaxis protein n=1 Tax=Rhizobium phaseoli RepID=UPI00030AFF8E rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:KEC74464.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
methyl-accepting chemotaxis protein
SCNpilot_cont_300_bf_scaffold_1241_5
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4116..5117
DNA (1002bp) protein (334aa)
Luciferase-like monooxygenase protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SNM8_RHIET
luciferase-like monooxygenase protein
Luciferase-like monooxygenase protein {ECO:0000313|EMBL:AGS23274.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi
SCNpilot_cont_300_bf_scaffold_1241_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5179..5925)
DNA (747bp) protein (249aa)
Probable transcriptional regulatory protein SHLA_56c00090 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZD0_9RHIZ rbh
UPF0082 protein
Probable transcriptional regulatory protein OV14_0234 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/
SCNpilot_cont_300_bf_scaffold_1241_7
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6154..6657
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HA53_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EPE95474.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
general stress protein
SCNpilot_cont_300_bf_scaffold_1241_8
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6665..7480)
DNA (816bp) protein (272aa)
Zn-dependent hydrolase n=1 Tax=Rhizobium mongolense RepID=UPI0003B3EABE
metallo-beta-lactamase family hydrolase protein
Metallo-beta-lactamase family hydrolase protein {ECO:0000313|EMBL:AJD42683.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
SCNpilot_cont_300_bf_scaffold_1241_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7573..8397)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V8G6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN87317.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1241_10
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8399..8986)
DNA (588bp) protein (196aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; R
5,10-methenyltetrahydrofolate synthetase n=1 Tax=Rhizobium sp. CF142 RepID=J2ANE3_9RHIZ
5,10-methenyltetrahydrofolate synthetase
SCNpilot_cont_300_bf_scaffold_1241_11

Not on your lists

comp(9077..9250)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=T1W9M9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AGU11229.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1241_12
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9419..9976)
DNA (558bp) protein (186aa)
Hydrolase, NUDIX family n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZZM4_9PROT
Hydrolase, NUDIX family {ECO:0000313|EMBL:EHM01542.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source
hydrolase
SCNpilot_cont_300_bf_scaffold_1241_13
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10263..10637)
DNA (375bp) protein (125aa)
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3PZ08_RHIE6
hypothetical protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
SCNpilot_cont_300_bf_scaffold_1241_14
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10686..10940)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VWI3_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJJ24970.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1241_15
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11280..13256
DNA (1977bp) protein (659aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/A
tktA; transketolase (EC:2.2.1.1)
Transketolase n=2 Tax=Agrobacterium RepID=A9CFK9_AGRT5 rbh
SCNpilot_cont_300_bf_scaffold_1241_16
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13322..14332
DNA (1011bp) protein (337aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales
Glyceraldehyde-3-phosphate dehydrogenase n=3 Tax=Sinorhizobium/Ensifer group RepID=C3MIJ0_RHISN rbh
glyceraldehyde-3-phosphate dehydrogenase rbh
SCNpilot_cont_300_bf_scaffold_1241_17
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14332..14913
DNA (582bp) protein (194aa)
DNA-binding response regulator n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XCZ8_RHIFR
DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:AFL53754.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobiu
Displaying 17 items

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