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SCNpilot_cont_300_bf_scaffold_1258

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Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1258_1
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..2167)
DNA (2166bp) protein (722aa)
ATP-dependent transcriptional regulator n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KRC9_MESAW rbh
ATP-dependent transcriptional regulator rbh
LuxR family transcriptional regulator {ECO:0000313|EMBL:ESY86776.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
SCNpilot_cont_300_bf_scaffold_1258_2
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2376..2819
DNA (444bp) protein (148aa)
ATPase n=1 Tax=Rhizobium leguminosarum RepID=UPI00027D8E72
Activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ABR63927.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; S
SCNpilot_cont_300_bf_scaffold_1258_3
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2864..3781)
DNA (918bp) protein (306aa)
50S ribosomal protein L3 glutamine methyltransferase PrmB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C0S9_9RHIZ rbh
SAM-dependent methyltransferase {ECO:0000313|EMBL:KGE01092.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium
50S ribosomal protein L3 glutamine methyltransferase
SCNpilot_cont_300_bf_scaffold_1258_4
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3921..4715
DNA (795bp) protein (265aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; R
Pseudouridine synthase n=1 Tax=Rhizobium sp. CF142 RepID=J2L9C3_9RHIZ rbh
pseudouridine synthase
SCNpilot_cont_300_bf_scaffold_1258_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4784..5464
DNA (681bp) protein (227aa)
Transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9X6V1_RHILT rbh
Transcriptional regulator {ECO:0000313|EMBL:EJB04546.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sou
GntR family transcriptional regulator rbh
SCNpilot_cont_300_bf_scaffold_1258_6
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5461..6747
DNA (1287bp) protein (429aa)
Cyanate permease n=1 Tax=Rhizobium sp. CF142 RepID=J2LC42_9RHIZ rbh
Cyanate permease {ECO:0000313|EMBL:EJJ31072.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhi
major facilitator superfamily protein rbh
SCNpilot_cont_300_bf_scaffold_1258_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7102..9084
DNA (1983bp) protein (661aa)
Chemoreceptor McpA n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X4A5_RHIFR rbh
Chemoreceptor McpA {ECO:0000313|EMBL:EYR81660.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
mcpA7; chemoreceptor McpA
SCNpilot_cont_300_bf_scaffold_1258_8
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9207..9437
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1SMF2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ26418.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1258_9
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9520..10137)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q2W8_9RHIZ rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDI11614.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_1258_10
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10284..11009
DNA (726bp) protein (242aa)
Putative glutathione S-transferase n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M681_RHIL3 rbh
Glutathione S-transferase {ECO:0000313|EMBL:KDP71783.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source=
putative glutathione S-transferase rbh
SCNpilot_cont_300_bf_scaffold_1258_11
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11156..11671
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AFG2_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE99794.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
SCNpilot_cont_300_bf_scaffold_1258_12
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11963..12970
DNA (1008bp) protein (336aa)
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Rhizobium sp. CF122 RepID=J2IM51_9RHIZ rbh
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:EJL49793.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphap
glxA; HTH-type transcriptional regulator glxA
SCNpilot_cont_300_bf_scaffold_1258_13
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12979..13917)
DNA (939bp) protein (313aa)
Transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0KTM4_RHILT
Transcriptional regulator {ECO:0000313|EMBL:EJC80999.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sou
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1258_14
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14085..14876
DNA (792bp) protein (264aa)
Esterase/lipase n=1 Tax=Rhizobium sp. CF080 RepID=J3CRJ7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUB96239.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
Alpha/beta hydrolase fold-3 domain protein
SCNpilot_cont_300_bf_scaffold_1258_15
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14896..16080
DNA (1185bp) protein (395aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F747_9RHIZ rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EHS51364.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium
bpeE; Multidrug efflux pump BpeE
SCNpilot_cont_300_bf_scaffold_1258_16
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16202..19393
DNA (3192bp) protein (1064aa)
transporter n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00038292C2
Putative efflux protein {ECO:0000313|EMBL:GAK70058.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
mexF; AcrB/AcrD/AcrF family protein
SCNpilot_cont_300_bf_scaffold_1258_17
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19447..19695)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QCY3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF58871.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1258_18
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19749..20735)
DNA (987bp) protein (329aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L381_9RHIZ rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJJ27499.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobact
GGDEF domain-containing protein
SCNpilot_cont_300_bf_scaffold_1258_19
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20827..22779)
DNA (1953bp) protein (651aa)
CelB protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K192_AGRVS rbh
celB; celB protein rbh
CelB protein {ECO:0000313|EMBL:ACM38640.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agro
SCNpilot_cont_300_bf_scaffold_1258_20
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23075..25252)
DNA (2178bp) protein (726aa)
Cellulose synthase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K193_AGRVS rbh
celA; cellulose synthase rbh
Cellulose synthase {ECO:0000313|EMBL:ACM38641.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source
SCNpilot_cont_300_bf_scaffold_1258_21
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25256..26194)
DNA (939bp) protein (313aa)
Cellulose biosynthesis protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K194_AGRVS
cellulose biosynthesis protein
Cellulose biosynthesis protein {ECO:0000313|EMBL:ACM38642.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacteri
SCNpilot_cont_300_bf_scaffold_1258_22
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26439..28616
DNA (2178bp) protein (726aa)
Cellulose synthesis protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K195_AGRVS rbh
celG; cellulose synthesis protein rbh
Cellulose synthesis protein {ECO:0000313|EMBL:ACM38643.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.
SCNpilot_cont_300_bf_scaffold_1258_23
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28588..29145)
DNA (558bp) protein (186aa)
Putative threonine efflux protein n=1 Tax=Rhizobium sp. CF142 RepID=J1T079_9RHIZ
Putative threonine efflux protein {ECO:0000313|EMBL:EJJ25001.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacte
lysine exporter protein
SCNpilot_cont_300_bf_scaffold_1258_24
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29269..29751
DNA (483bp) protein (161aa)
transcription elongation factor n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003774B39
putative transcription elongation factor
Putative transcription elongation factor {ECO:0000313|EMBL:AHK44724.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; En
SCNpilot_cont_300_bf_scaffold_1258_25
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29875..30813
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UXB5_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN85396.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1258_26
Rhizobium mongolense, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30940..31263)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B7BBC4
SCNpilot_cont_300_bf_scaffold_1258_27
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31359..32348)
DNA (990bp) protein (330aa)
endonuclease n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037B556D rbh
Uncharacterized protein {ECO:0000313|EMBL:KEC81955.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1258_28
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32345..33448)
DNA (1104bp) protein (368aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000256|HAMAP-Rule:MF_01727}; EC=3.6.3.20 {ECO:0000256|HAMAP-Rule:MF_01727};; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteob
ATPase component of ABC-type sugar transporter n=1 Tax=Rhizobium sp. CF080 RepID=J3BWY3_9RHIZ rbh
ugpC; Sn-glycerol-3-phosphate import ATP-binding protein UgpC
SCNpilot_cont_300_bf_scaffold_1258_29
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33457..33930)
DNA (474bp) protein (158aa)
sn-glycerol-3-phosphate ABC transporter permease n=1 Tax=Martelella mediterranea RepID=UPI00036018EF
Glycerol-3-phosphate transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CCM74084.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobi
ugpE; binding-protein-dependent transport system inner membrane component
SCNpilot_cont_300_bf_scaffold_1258_30
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34239..35120)
DNA (882bp) protein (294aa)
sn-glycerol-3-phosphate ABC transporter membrane protein n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XQU8_RHIRD rbh
Glycerol-3-phosphate transporter permease {ECO:0000313|EMBL:EPR21493.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
ugpA; sn-glycerol 3-phosphate transport system permease protein
Displaying items 1-30 of 44 in total

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