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SCNpilot_cont_300_bf_scaffold_1270

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1270_1
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..484)
DNA (483bp) protein (161aa)
Putative D,D-dipeptide transport ATP-binding protein ddpD n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UAK6_9RHIZ
ABC transporter, ATP-binding protein
Putative D,D-dipeptide transport ATP-binding protein ddpD {ECO:0000313|EMBL:ENN87233.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrob
SCNpilot_cont_300_bf_scaffold_1270_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(481..1386)
DNA (906bp) protein (302aa)
ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQ66_RHITR rbh
ABC transporter, permease protein rbh
ABC transporter, permease protein {ECO:0000313|EMBL:AGB72225.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobiu
SCNpilot_cont_300_bf_scaffold_1270_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1379..2386)
DNA (1008bp) protein (336aa)
ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQ42_RHITR rbh
ABC transporter, permease protein rbh
ABC transporter, permease protein {ECO:0000313|EMBL:AGB72224.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobiu
SCNpilot_cont_300_bf_scaffold_1270_4
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2595..4127)
DNA (1533bp) protein (511aa)
Family 5 extracellular solute-binding protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I2R6_9RHIZ rbh
Family 5 extracellular solute-binding protein {ECO:0000313|EMBL:EPE94048.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gro
ABC transporter, substrate-binding protein rbh
SCNpilot_cont_300_bf_scaffold_1270_5
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4681..7536
DNA (2856bp) protein (952aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DDP7_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EDQ32110.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DF
Putative flagella associated protein
SCNpilot_cont_300_bf_scaffold_1270_6
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7645..8409
DNA (765bp) protein (255aa)
UPF0271 protein H009_01829 n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8AG92_RHIRD rbh
UPF0271 protein H009_01829 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacter
LamB/YcsF family protein
SCNpilot_cont_300_bf_scaffold_1270_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8406..9779
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETK4_9RHIZ rbh
Biotin-dependent carboxylase {ECO:0000313|EMBL:EYR78289.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1270_8
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9769..9951
DNA (183bp) protein (61aa)
putative allophanate hydrolase protein (EC:3.5.1.54)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=Q7CTL7_AGRT5
Acetyl-COA carboxylase {ECO:0000313|EMBL:KGE83022.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_1270_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9948..11663
DNA (1716bp) protein (572aa)
Acetyl-/propionyl-coenzyme A carboxylase alpha chain {ECO:0000313|EMBL:EYR78288.1}; EC=6.3.4.14 {ECO:0000313|EMBL:EYR78288.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rh
Acetyl-/propionyl-coenzyme A carboxylase alpha chain n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW81_9RHIZ rbh
accCch; acetyl-CoA carboxylase
SCNpilot_cont_300_bf_scaffold_1270_10
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11724..13223)
DNA (1500bp) protein (500aa)
Protease Do {ECO:0000313|EMBL:EUB95636.1}; EC=3.4.21.108 {ECO:0000313|EMBL:EUB95636.1};; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiac
Putative serine protease n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U653_RHIRD rbh
Peptidase Do rbh
SCNpilot_cont_300_bf_scaffold_1270_11
unknown

Not on your lists

13258..13950
DNA (693bp) protein (231aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1270_12
Rhizobium sp. UR51a, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14108..15361
DNA (1254bp) protein (418aa)
RND family efflux transporter, MFP subunit n=1 Tax=Rhizobium sp. IRBG74 RepID=U4QG51_9RHIZ rbh
Putative Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:KIV63153.1}; TaxID=1604021 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agroba
RND family efflux transporter, MFP subunit rbh
SCNpilot_cont_300_bf_scaffold_1270_13
unknown

Not on your lists

15309..16598
DNA (1290bp) protein (430aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1270_14
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(16650..16883)
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=RBG_16_Acidobacteria_68_9_curated
SCNpilot_cont_300_bf_scaffold_1270_15
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17592..17834)
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:EXI70591.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
SCNpilot_cont_300_bf_scaffold_1270_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18519..18869
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EWF6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83886.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1270_17
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18872..19390
DNA (519bp) protein (173aa)
RES domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IQ78_XANP2
RES domain-containing protein
RES domain protein {ECO:0000313|EMBL:ABS70174.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus
SCNpilot_cont_300_bf_scaffold_1270_18
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20101..20310
DNA (210bp) protein (70aa)
cobalt transporter n=1 Tax=Rhizobium leguminosarum RepID=UPI00036DB144
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM59028.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_1270_19
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20323..21066
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3H9E9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EPE95522.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1270_20
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21166..21786
DNA (621bp) protein (207aa)
Putative transmembrane protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MCE6_RHIL3
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:CAK09385.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;
SCNpilot_cont_300_bf_scaffold_1270_21
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21809..22318)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003807247
Uncharacterized protein {ECO:0000313|EMBL:KEC79834.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1270_22
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22333..22626)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EP43_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR80980.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1270_23
bacterium YEK0313, Bacteria

Not on your lists

comp(22692..24944)
DNA (2253bp) protein (751aa)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein n=1 Tax=Citreicella sp. 357 RepID=I1AXP4_9RHOB rbh
4-hydroxybenzoyl-CoA reductase subunit alpha {ECO:0000313|EMBL:CEJ12966.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
SCNpilot_cont_300_bf_scaffold_1270_24
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25023..25949)
DNA (927bp) protein (309aa)
UPI0003D024D6 related cluster n=1 Tax=unknown RepID=UPI0003D024D6
Molybdopterin dehydrogenase {ECO:0000313|EMBL:KEQ10635.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
molybdopterin dehydrogenase FAD-binding protein
SCNpilot_cont_300_bf_scaffold_1270_25
bacterium YEK0313, Bacteria

Not on your lists

comp(25946..26443)
DNA (498bp) protein (166aa)
oxidoreductase with iron-sulfur subunit (EC:1.2.99.2)
Putative oxidoreductase with iron-sulfur subunit n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EAD9_BRASB
Carbon monoxide dehydrogenase small chain {ECO:0000313|EMBL:CEJ12968.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_300_bf_scaffold_1270_26
bacterium YEK0313, Bacteria

Not on your lists


26587..27165
DNA (579bp) protein (193aa)
50S ribosomal protein L21 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1I8S9_9BRAD
HTH-type transcriptional regulator MtrR {ECO:0000313|EMBL:CEJ12969.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative transcriptional regulatory protein TetR family
SCNpilot_cont_300_bf_scaffold_1270_27
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27272..28735)
DNA (1464bp) protein (488aa)
Putative L-sorbosone dehydrogenase protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B934_RHILS rbh
L-sorbosone dehydrogenase protein rbh
Putative L-sorbosone dehydrogenase protein {ECO:0000313|EMBL:ACS60422.1}; Flags: Precursor;; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/A
SCNpilot_cont_300_bf_scaffold_1270_28
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28735..29172)
DNA (438bp) protein (146aa)
membrane protein n=1 Tax=Rhizobium phaseoli RepID=UPI00031CB2F9
Uncharacterized protein {ECO:0000313|EMBL:KEC69894.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1270_29
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29452..30462
DNA (1011bp) protein (337aa)
Taurine transporter subunit periplasmic-binding component of ABC superfamily n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FDD3_9RHIZ
Taurine transporter subunit periplasmic-binding component of ABC superfamily {ECO:0000313|EMBL:CCV14178.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobac
tauA; sulfonate/nitrate/taurine transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_1270_30
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30600..31070
DNA (471bp) protein (157aa)
Taurine import ATP-binding protein TauB {ECO:0000256|HAMAP-Rule:MF_01714}; EC=3.6.3.36 {ECO:0000256|HAMAP-Rule:MF_01714};; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospi
Sulfonate/nitrate/taurine transport system ATP-binding protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2A9_AZOS1
tauB; sulfonate/nitrate/taurine transport system ATP-binding protein
Displaying items 1-30 of 45 in total

View Taxonomy