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SCNpilot_cont_300_bf_scaffold_1503

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1503_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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356..2818
DNA (2463bp) protein (821aa)
ATP-dependent helicase HrpB n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHA2_RHITR
hrpB; ATP-dependent helicase HrpB
ATP-dependent helicase HrpB {ECO:0000313|EMBL:AGB69494.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" s
SCNpilot_cont_300_bf_scaffold_1503_2
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2936..4243
DNA (1308bp) protein (436aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobi
regB; sensor histidine kinase RegB (EC:2.7.13.3)
ATPase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003758FE8
SCNpilot_cont_300_bf_scaffold_1503_3
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4415..4999
DNA (585bp) protein (195aa)
Two component transcriptional regulator, Fis family n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=B5ZVV1_RHILW
actR-1; acid tolerance response regulator ActR -1
Acid tolerance response regulator ActR-1 {ECO:0000313|EMBL:AJD39439.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
SCNpilot_cont_300_bf_scaffold_1503_4
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5022..5588)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I876_9RHIZ
putative conserved protein
Putative conserved protein {ECO:0000313|EMBL:CDM55745.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" so
SCNpilot_cont_300_bf_scaffold_1503_5
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5725..6405
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B7120B rbh
L,D-transpeptidase domain-containing protein
L,D-transpeptidase domain-containing protein {ECO:0000313|EMBL:AJD39437.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gro
SCNpilot_cont_300_bf_scaffold_1503_6
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6492..8297)
DNA (1806bp) protein (602aa)
Malate synthase G {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572}; EC=2.3.3.9 {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572};; TaxID=1156935 species="Bacteria; Prote
malate synthase (EC:2.3.3.9)
Malate synthase G n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QAZ8_9RHIZ
SCNpilot_cont_300_bf_scaffold_1503_7
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8297..8617)
DNA (321bp) protein (107aa)
Malate synthase G {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572}; EC=2.3.3.9 {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572};; TaxID=1416753 species="Bacteria; Prote
malate synthase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000379A66D
glcB; malate synthase G
SCNpilot_cont_300_bf_scaffold_1503_8
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8742..10727)
DNA (1986bp) protein (662aa)
hydantoinase n=1 Tax=Rhizobium meliloti RepID=UPI0003709072 rbh
N-methylhydantoinase A/acetone carboxylase, beta subunit {ECO:0000313|EMBL:EJK80782.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrob
hydantoinase/oxoprolinase rbh
SCNpilot_cont_300_bf_scaffold_1503_9
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10849..12252)
DNA (1404bp) protein (468aa)
Probable cytochrome P450 protein n=2 Tax=Rhizobium RepID=B3PWI9_RHIE6
Cytochrome P450 {ECO:0000313|EMBL:KEQ03115.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhiz
cytochrome P450 protein
SCNpilot_cont_300_bf_scaffold_1503_10
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12300..13238)
DNA (939bp) protein (313aa)
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3PWI8_RHIE6
Uncharacterized protein {ECO:0000313|EMBL:KEC71955.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1503_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13440..14747)
DNA (1308bp) protein (436aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHD8_RHITR
hslU; ATP-dependent protease peptidase subunit HslU
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=698761 species="Bacteria; Proteobac
SCNpilot_cont_300_bf_scaffold_1503_12
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14799..15323)
DNA (525bp) protein (175aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=990285 specie
hslV; ATP-dependent protease peptidase subunit HslV (EC:3.4.25.2)
ATP-dependent protease subunit HslV n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HQJ6_9RHIZ
SCNpilot_cont_300_bf_scaffold_1503_13
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15537..16145
DNA (609bp) protein (203aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, E
imidazoleglycerol-phosphate dehydratase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000366C71D
hisB; imidazoleglycerol-phosphate dehydratase
SCNpilot_cont_300_bf_scaffold_1503_14
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16179..16658
DNA (480bp) protein (160aa)
Putative transmembrane protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MNB7_RHIL3
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:CAK05535.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;
SCNpilot_cont_300_bf_scaffold_1503_15
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16659..17309
DNA (651bp) protein (217aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2KE58_RHIEC rbh
hisH; imidazole glycerol phosphate synthase subunit HisH
SCNpilot_cont_300_bf_scaffold_1503_16
Rhizobium sp. UR51a, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17324..18064
DNA (741bp) protein (247aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Rhizobium lupini HPC(L) RepID=K5CWB6_RHILU rbh
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
SCNpilot_cont_300_bf_scaffold_1503_17
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18065..18841
DNA (777bp) protein (259aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
hisF; imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0L301_AGRSH rbh
SCNpilot_cont_300_bf_scaffold_1503_18
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18851..19174
DNA (324bp) protein (108aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:
hisE; phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31)
Phosphoribosyl-ATP pyrophosphatase n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=J0KW12_RHILT
SCNpilot_cont_300_bf_scaffold_1503_19
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19171..20166
DNA (996bp) protein (332aa)
coaA; pantothenate kinase (EC:2.7.1.33)
Pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530};; Pantothenic acid kinase {ECO:000025
pantothenate kinase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037F08FA
SCNpilot_cont_300_bf_scaffold_1503_20
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20221..20814)
DNA (594bp) protein (198aa)
Alkylated DNA repair protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CF22_RHILT
Alkylated DNA repair protein {ECO:0000313|EMBL:EJC81917.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
2OG-Fe(II) oxygenase
SCNpilot_cont_300_bf_scaffold_1503_21
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20906..21391)
DNA (486bp) protein (162aa)
Probable peptide chain release factor protein (Peptidyl-tRNA hydrolase protein) n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3PWH5_RHIE6
peptide chain release factor 1 protein
Peptidyl-tRNA hydrolase domain-containing protein {ECO:0000313|EMBL:KEC71941.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteriu
SCNpilot_cont_300_bf_scaffold_1503_22
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21489..22451)
DNA (963bp) protein (321aa)
pckA; phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AEK6_RHIET
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
SCNpilot_cont_300_bf_scaffold_1503_23
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22451..22873)
DNA (423bp) protein (141aa)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PJK2_9RHIZ
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
pckA; phosphoenolpyruvate carboxykinase (ATP)
SCNpilot_cont_300_bf_scaffold_1503_24
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23495..23998
DNA (504bp) protein (168aa)
Two-component response regulator protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JG58_AGRRK
chvI; two-component response regulator protein
Putative two-component response regulator {ECO:0000313|EMBL:GAJ95666.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
SCNpilot_cont_300_bf_scaffold_1503_25
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24066..25853
DNA (1788bp) protein (596aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobi
Sensor protein chvG n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PN07_9RHIZ
sensor protein ChvG
SCNpilot_cont_300_bf_scaffold_1503_26
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25855..26310
DNA (456bp) protein (152aa)
Serine kinase of the HPr protein, regulates carbohydrate metabolism n=1 Tax=Rhizobium sp. CF080 RepID=J3BSF6_9RHIZ
Serine kinase of the HPr protein, regulates carbohydrate metabolism
Serine kinase of the HPr protein, regulates carbohydrate metabolism {ECO:0000313|EMBL:CDN56338.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobiu
SCNpilot_cont_300_bf_scaffold_1503_27
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26452..26853
DNA (402bp) protein (134aa)
protein-N(pi)-phosphohistidine-sugarphosphotransferase (EC:2.7.1.69)
Phosphotransferase system, mannose/fructose-specific component IIA n=3 Tax=Rhizobium RepID=J3BIK1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCM77889.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
SCNpilot_cont_300_bf_scaffold_1503_28
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26874..27146
DNA (273bp) protein (91aa)
Phosphotransferase system HPr (HPr) family protein n=1 Tax=Rhizobium sp. CF142 RepID=J2LCN6_9RHIZ
Phosphotransferase system HPr (HPr) family protein {ECO:0000313|EMBL:EJJ30834.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rh
putative phosphotransferase system,phosphocarrier HPr protein
SCNpilot_cont_300_bf_scaffold_1503_29
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27304..28704
DNA (1401bp) protein (467aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=2 Tax=Agrobacterium RepID=SAHH_AGRT5 rbh
ahcY; S-adenosylhomocysteine hydrolase
SCNpilot_cont_300_bf_scaffold_1503_30
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28911..31505
DNA (2595bp) protein (865aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobi
Histidine kinase n=1 Tax=Rhizobium sp. AP16 RepID=J2CUI8_9RHIZ
two-component sensor histidine kinase
Displaying items 1-30 of 35 in total

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