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SCNpilot_cont_300_bf_scaffold_1570

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1570_1
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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615..1379
DNA (765bp) protein (255aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-
ppnK; NAD(+) kinase (EC:2.7.1.23)
inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Rhizobium mongolense RepID=UPI0003B72700
SCNpilot_cont_300_bf_scaffold_1570_2
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1390..1869
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X7S4_RHIFR
Uncharacterized protein {ECO:0000313|EMBL:KEC79377.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1570_3
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1882..2520)
DNA (639bp) protein (213aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain containing protein n=1 Tax=Rhizobium sp. CF142 RepID=J1TAB2_9RHIZ rbh
DnaJ-class molecular chaperone with C-terminal Zn finger domain containing protein {ECO:0000313|EMBL:EJJ28696.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhi
DnaJ family heat shock protein
SCNpilot_cont_300_bf_scaffold_1570_4
Rhizobium lupini, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2730..3740)
DNA (1011bp) protein (337aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1229491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiace
tRNA-dihydrouridine synthase n=1 Tax=Rhizobium lupini HPC(L) RepID=K5DX93_RHILU rbh
dusA; tRNA-dihydrouridine synthase A
SCNpilot_cont_300_bf_scaffold_1570_5
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4052..5053
DNA (1002bp) protein (334aa)
Endoglucanase {ECO:0000256|RuleBase:RU361153}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361153};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; S
Uncharacterized protein n=1 Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U2W1_SULKY
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1570_6
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5060..6154)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000360FB75
Uncharacterized protein {ECO:0000313|EMBL:KCV80942.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium a
putative uncharacterized protein
SCNpilot_cont_300_bf_scaffold_1570_7
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6300..6995
DNA (696bp) protein (232aa)
putative fumarylpyruvate hydrolase protein (EC:3.7.1.5)
Putative fumarylpyruvate hydrolase protein {ECO:0000313|EMBL:CDM57816.1}; EC=3.7.1.5 {ECO:0000313|EMBL:CDM57816.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; R
Putative isomerase/hydrolase n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PX58_9RHIZ
SCNpilot_cont_300_bf_scaffold_1570_8
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7005..7556
DNA (552bp) protein (184aa)
acetyltransferase n=1 Tax=Rhizobium mongolense RepID=UPI0003B41D87
Uncharacterized protein {ECO:0000313|EMBL:ENN89309.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
O-acetyltransferase trimeric LpxA-like protein
SCNpilot_cont_300_bf_scaffold_1570_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7634..8032)
DNA (399bp) protein (133aa)
Zinc uptake transcriptional regulator protein, Fur family n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AI12_RHIET
Fur family ferric uptake regulator protein
Zinc uptake transcriptional regulator protein {ECO:0000313|EMBL:KEC73667.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gr
SCNpilot_cont_300_bf_scaffold_1570_10
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8029..8841)
DNA (813bp) protein (271aa)
membrane protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037E20BE
zinc ABC transporter, permease protein
Zinc ABC transporter, permease protein {ECO:0000313|EMBL:AHK44598.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensi
SCNpilot_cont_300_bf_scaffold_1570_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8834..9739)
DNA (906bp) protein (302aa)
Zinc import ATP-binding protein ZnuC {ECO:0000256|HAMAP-Rule:MF_01725}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01725};; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
ATPase component of Mn/Zn ABC-type transporter n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0V1N5_RHILV
zinc ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_1570_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9841..10779
DNA (939bp) protein (313aa)
zinc transporter n=1 Tax=Rhizobium giardinii RepID=UPI000381489B rbh
high-affinity zinc ABC uptake transporter, ZnuA-like substrate-binding protein
High-affinity zinc ABC uptake transporter, ZnuA-like substrate-binding protein {ECO:0000313|EMBL:AGB71484.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobia
SCNpilot_cont_300_bf_scaffold_1570_13
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11952..12761
DNA (810bp) protein (270aa)
Putative conserved hypothetical TPR repeat protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MLE2_RHIL3
hypothetical protein
Putative conserved hypothetical TPR repeat protein {ECO:0000313|EMBL:CAK06211.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteriu
SCNpilot_cont_300_bf_scaffold_1570_14
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13268..14302)
DNA (1035bp) protein (345aa)
Putative oxidoreductase protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V5U5_9RHIZ
oxidoreductase, aldo/keto reductase family
Putative oxidoreductase protein {ECO:0000313|EMBL:ENN89220.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
SCNpilot_cont_300_bf_scaffold_1570_15
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14430..15563)
DNA (1134bp) protein (378aa)
Putative oxidoreductase protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PWG2_9RHIZ
Putative oxidoreductase protein {ECO:0000313|EMBL:CCM75950.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium
putative oxidoreductase protein
SCNpilot_cont_300_bf_scaffold_1570_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15577..16338)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQG2_9RHIZ rbh
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:EYR80672.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD1
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1570_17
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16396..16725)
DNA (330bp) protein (110aa)
Beta-mannosidase n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F2A7_9RHIZ
Beta-mannosidase {ECO:0000313|EMBL:KGE00651.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhi
Beta-mannosidase
SCNpilot_cont_300_bf_scaffold_1570_18
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

Not on your lists

16904..17797
DNA (894bp) protein (298aa)
Marine sediment metagenome DNA, contig: S06H3_L00886 Tax=RBG_13_Aminicenantes_59_9_curated
SCNpilot_cont_300_bf_scaffold_1570_19
unknown

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18029..18304
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1570_20
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18795..19880)
DNA (1086bp) protein (362aa)
Putative sugar ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMU5_RHITR
putative sugar ABC transporter, ATP-binding protein
Putative sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB71395.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteri
SCNpilot_cont_300_bf_scaffold_1570_21
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19887..20714)
DNA (828bp) protein (276aa)
Maltose transport system permease protein malG n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A7H8_RHIFH
Maltose transport system permease protein malG
Maltose transport system permease protein malG {ECO:0000313|EMBL:CCE96208.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer gro
SCNpilot_cont_300_bf_scaffold_1570_22
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20657..21646)
DNA (990bp) protein (330aa)
Permease component of ABC-type sugar transporter n=1 Tax=Rhizobium sp. CF122 RepID=J2IQK3_9RHIZ
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:EJL58200.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
sugar ABC transporter
SCNpilot_cont_300_bf_scaffold_1570_23
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22034..23221)
DNA (1188bp) protein (396aa)
Putative periplasmic binding ABC transporter signal peptide protein n=1 Tax=Ensifer adhaerens RepID=I0FXD6_ENSAD rbh
putative sugar ABC transporter, substrate-binding protein
Putative sugar ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AHK44614.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/
SCNpilot_cont_300_bf_scaffold_1570_24
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23657..24688
DNA (1032bp) protein (344aa)
LacI family transcriptional regulator n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HHL7_9RHIZ
LacI family transcriptional regulator {ECO:0000313|EMBL:EPE98259.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhiz
LacI family transcriptional regulator protein
SCNpilot_cont_300_bf_scaffold_1570_25
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24761..25717)
DNA (957bp) protein (319aa)
gnd; 6-phosphogluconate dehydrogenase, decarboxylating (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485};; TaxID=151
6-phosphogluconate dehydrogenase, decarboxylating n=2 Tax=Rhizobium RepID=U4PTA2_9RHIZ
Displaying 25 items

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