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SCNpilot_cont_300_bf_scaffold_1798

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1798_1
unknown

Not on your lists

comp(3..1094)
DNA (1092bp) protein (364aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1798_2
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1106..1801)
DNA (696bp) protein (232aa)
von Willebrand factor type A n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HT03_CYAP4
von Willebrand factor A
von Willebrand factor type A {ECO:0000313|EMBL:ACL42800.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 /
SCNpilot_cont_300_bf_scaffold_1798_3
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1810..3285)
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034CA86C
FHA domain-containing protein
FHA domain containing protein {ECO:0000313|EMBL:ACL44859.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425
SCNpilot_cont_300_bf_scaffold_1798_4
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3282..4559)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GRQ6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA89453.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobi
SCNpilot_cont_300_bf_scaffold_1798_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(4559..5605)
DNA (1047bp) protein (349aa)
Serine/threonine protein kinase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U8K6_9CHLR
Serine/threonine protein kinase {ECO:0000313|EMBL:EFH80217.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobact
Serine/threonine-protein kinase-like domain-containing protein
SCNpilot_cont_300_bf_scaffold_1798_6
unknown

Not on your lists

comp(5605..5844)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1798_7
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6088..7662)
DNA (1575bp) protein (525aa)
TPR domain protein n=2 Tax=Arthrospira platensis RepID=D4ZXQ2_ARTPN
Uncharacterized protein {ECO:0000313|EMBL:KKC31894.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
TPR domain protein
SCNpilot_cont_300_bf_scaffold_1798_8
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7806..8162
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NN90_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS31787.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
two component, response regulator
SCNpilot_cont_300_bf_scaffold_1798_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8192..8665
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P036_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS31788.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1798_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8702..10987)
DNA (2286bp) protein (762aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NRR5_9BRAD
multi-sensor Signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_1798_11
Pantoea sp. BL1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11300..11458
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036EA286
Amino acid transporter {ECO:0000313|EMBL:KJV49780.1}; TaxID=1628190 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. BL1.;"
octopine ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_1798_12
unknown

Not on your lists

11472..11648
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1798_13
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11599..11862
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037671FD
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:EHS52799.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrob
nocQ; nopaline ABC transporter
SCNpilot_cont_300_bf_scaffold_1798_14
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11872..12129
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037671FD
nocQ; nopaline ABC transporter
Nopaline ABC transporter {ECO:0000313|EMBL:ACM28420.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Ag
SCNpilot_cont_300_bf_scaffold_1798_15
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12141..12653
DNA (513bp) protein (171aa)
UPI0003CF5B2D related cluster n=1 Tax=unknown RepID=UPI0003CF5B2D
nocMc; nopaline ABC transporter permease
Nopaline ABC transporter, permease protein {ECO:0000313|EMBL:ACE94943.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
SCNpilot_cont_300_bf_scaffold_1798_16
unknown

Not on your lists

comp(12622..12747)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1798_17
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12907..14610
DNA (1704bp) protein (568aa)
Acetolactate synthase II large subunit {ECO:0000313|EMBL:EBA08606.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EBA08606.1};; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; R
Acetolactate synthase II large subunit n=1 Tax=Sagittula stellata E-37 RepID=A3K347_9RHOB rbh
putative acetolactate synthase
SCNpilot_cont_300_bf_scaffold_1798_18
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14711..15742
DNA (1032bp) protein (344aa)
ABC transporter substrate-binding protein n=1 Tax=Sagittula stellata E-37 RepID=A3K346_9RHOB rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EBA08605.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sa
potD2; putative ABC transporter, spermidine/putrescine-binding protein PotD
SCNpilot_cont_300_bf_scaffold_1798_19
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15747..16196
DNA (450bp) protein (150aa)
Putrescine transport ATP-binding protein PotA n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QXE1_9RHOB
Putrescine transport ATP-binding protein PotA {ECO:0000313|EMBL:EPX86026.1}; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" sourc
ABC transporter
SCNpilot_cont_300_bf_scaffold_1798_20
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16136..16741
DNA (606bp) protein (202aa)
Uridine kinase:ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase n=1 Tax=Sagittula stellata E-37 RepID=A3K345_9RHOB
Uridine kinase:ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase {ECO:0000313|EMBL:EBA08604.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rho
ABC transporter-like protein
SCNpilot_cont_300_bf_scaffold_1798_21
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16738..17595
DNA (858bp) protein (286aa)
Hypothetical polyamine ABC transporter, permease protein n=1 Tax=Sagittula stellata E-37 RepID=A3K344_9RHOB rbh
Putative polyamine ABC transporter, permease protein {ECO:0000313|EMBL:KHQ51281.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus
binding-protein-dependent transport system inner membrane protein
SCNpilot_cont_300_bf_scaffold_1798_22
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17592..18398
DNA (807bp) protein (269aa)
Spermidine Putrescine ABC transporter permease component potC n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9R253_9RHOB rbh
Spermidine Putrescine ABC transporter permease component potC {ECO:0000313|EMBL:KHQ51280.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Po
spermidine/putrescine transport system, permease protein
SCNpilot_cont_300_bf_scaffold_1798_23
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18433..19161
DNA (729bp) protein (243aa)
Putative hydantoin racemase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9SI70_9RHOB
Putative hydantoin racemase {ECO:0000313|EMBL:KHQ51279.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus s
Asp/Glu racemase
SCNpilot_cont_300_bf_scaffold_1798_24
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19158..20078
DNA (921bp) protein (307aa)
Putative xylanase/chitin deacetylase n=1 Tax=Sagittula stellata E-37 RepID=A3K341_9RHOB rbh
Putative xylanase/chitin deacetylase {ECO:0000313|EMBL:KHQ51278.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Pont
polysaccharide deacetylase
SCNpilot_cont_300_bf_scaffold_1798_25
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20088..22082
DNA (1995bp) protein (665aa)
Putative carboxypeptidase n=1 Tax=Sagittula stellata E-37 RepID=A3K339_9RHOB rbh
Putative carboxypeptidase {ECO:0000313|EMBL:KHQ51276.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp.
acetylornithine deacetylase
SCNpilot_cont_300_bf_scaffold_1798_26
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22088..22831
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3K338_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EBA08597.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E
cupin
SCNpilot_cont_300_bf_scaffold_1798_27
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22835..23761)
DNA (927bp) protein (309aa)
Transcriptional regulator, LysR family n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9SI74_9RHOB rbh
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:KHQ51274.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" so
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1798_28
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23859..25247
DNA (1389bp) protein (463aa)
D-2-hydroxyglutarate dehydrogenase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9S770_9RHOB rbh
Oxidoreductase {ECO:0000313|EMBL:KHQ51273.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
glcD5; glycolate oxidase subunit GlcD
SCNpilot_cont_300_bf_scaffold_1798_29
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25856..26734
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037F0ED1
short-chain dehydrogenase/reductase (SDR) rbh
Short-chain dehydrogenase/reductase (SDR) {ECO:0000313|EMBL:CCH88477.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacte
SCNpilot_cont_300_bf_scaffold_1798_30
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26810..27136
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M3R8_METRJ
Uncharacterized protein {ECO:0000313|EMBL:GAN50421.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacter
hypothetical protein
Displaying items 1-30 of 39 in total

View Taxonomy