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SCNpilot_cont_300_bf_scaffold_1823

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1823_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..987
DNA (987bp) protein (329aa)
Two component sensor kinase/response regulator hybrid n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PYL0_9RHIZ
Signal transduction histidine kinase {ECO:0000313|EMBL:EYR78522.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD
two component sensor kinase/response regulator hybrid
SCNpilot_cont_300_bf_scaffold_1823_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1203..2228
DNA (1026bp) protein (342aa)
Response regulator protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q281_9RHIZ rbh
Response regulator {ECO:0000313|EMBL:EYR78523.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Response regulator protein
SCNpilot_cont_300_bf_scaffold_1823_3
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2259..2846)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00035EB080
Uncharacterized protein {ECO:0000313|EMBL:KEC80493.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1823_4
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2839..3501)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KLV9_RHISN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACP23395.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source
SCNpilot_cont_300_bf_scaffold_1823_5
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3682..5127)
DNA (1446bp) protein (482aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiacea
lpdA; dihydrolipoyl dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2P7U4_9RHIZ
SCNpilot_cont_300_bf_scaffold_1823_6
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5204..6493)
DNA (1290bp) protein (430aa)
pdhC-2; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex 2 (EC:2.3.1.12) rbh
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex 2 {ECO:0000313|EMBL:AGS26480.1}; EC=2.3.1.12 {ECO:0000313|EMBL:AGS26480.1};; TaxID=1328306 species="Bacteria;
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex 2 n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S9C5_RHIET rbh
SCNpilot_cont_300_bf_scaffold_1823_7
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6496..7494)
DNA (999bp) protein (333aa)
acoB4; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta (EC:1.1.1.-) rbh
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X3M0_RHIFR rbh
Acetoin dehydrogenase TPP-dependent subunit beta {ECO:0000313|EMBL:KEC80483.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer g
SCNpilot_cont_300_bf_scaffold_1823_8
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7491..8546)
DNA (1056bp) protein (352aa)
acoA4; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha (EC:1.1.1.-) rbh
acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003789A6E rbh
Acetoin dehydrogenase TPP-dependent subunit alpha {ECO:0000313|EMBL:KEC80484.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer
SCNpilot_cont_300_bf_scaffold_1823_9
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8548..9873)
DNA (1326bp) protein (442aa)
Putative homoserine dehydrogenase n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X3M2_RHIFR rbh
Homoserine dehydrogenase {ECO:0000313|EMBL:KEC80485.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" s
SAF domain-containing protein rbh
SCNpilot_cont_300_bf_scaffold_1823_10
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(10262..11212)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE64_NAKMY rbh
Prokaryotic protein of unknown function (DUF849)
Uncharacterized protein {ECO:0000313|EMBL:AHY47751.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubroba
SCNpilot_cont_300_bf_scaffold_1823_11
Loktanella cinnabarina, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11304..12239)
DNA (936bp) protein (312aa)
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2Z1V1_9RHOB rbh
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components {ECO:0000313|EMBL:GAD55320.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales
sugar ABC transporter permease protein
SCNpilot_cont_300_bf_scaffold_1823_12
Loktanella cinnabarina, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12187..13272)
DNA (1086bp) protein (362aa)
Ribose ABC transport system, ATP-binding protein RbsA n=1 Tax=Loktanella cinnabarina LL-001 RepID=U3ACE6_9RHOB
Ribose ABC transport system, ATP-binding protein RbsA {ECO:0000313|EMBL:GAD55319.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella
sugar ABC transporter ATP-binding protein
Displaying 12 items

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