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SCNpilot_cont_300_bf_scaffold_737

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_737_1
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..936
DNA (936bp) protein (312aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Ag
Double-strand break repair helicase AddA n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UZM1_9RHIZ
addA; double-strand break repair helicase AddA
SCNpilot_cont_300_bf_scaffold_737_2
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1016..1336
DNA (321bp) protein (107aa)
Thioredoxin n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U3F6_RHIRD
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacteriu
trxA; thioredoxin
SCNpilot_cont_300_bf_scaffold_737_3
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1398..2753)
DNA (1356bp) protein (452aa)
FolC n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AB44_RHIET
folC; folC
FolC {ECO:0000313|EMBL:EGE58213.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli C
SCNpilot_cont_300_bf_scaffold_737_4
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2845..3774)
DNA (930bp) protein (310aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Rhizobium sp. CF142 RepID=J1T007_9RHIZ
accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltr
SCNpilot_cont_300_bf_scaffold_737_5
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3829..4668)
DNA (840bp) protein (280aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1532558 species="
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
tryptophan synthase subunit alpha n=1 Tax=Rhizobium mongolense RepID=UPI0003B72EEF
SCNpilot_cont_300_bf_scaffold_737_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4673..5797)
DNA (1125bp) protein (375aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhi
trpB; tryptophan synthase beta chain (EC:4.2.1.20)
tryptophan synthase subunit beta n=1 Tax=Rhizobium giardinii RepID=UPI00036C29BB
SCNpilot_cont_300_bf_scaffold_737_7
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5890..6564)
DNA (675bp) protein (225aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_0013
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FAA4_9RHIZ rbh
Phosphoribosylanthranilate isomerase rbh
SCNpilot_cont_300_bf_scaffold_737_8
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6632..7393)
DNA (762bp) protein (254aa)
Zinc metallopeptidase protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JG41_AGRRK
zinc metallopeptidase
Uncharacterized protein {ECO:0000313|EMBL:KEA04637.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" sour
SCNpilot_cont_300_bf_scaffold_737_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7495..7938)
DNA (444bp) protein (148aa)
membrane protein n=1 Tax=Rhizobium RepID=UPI0003621AC8
membrane protein
Membrane protein {ECO:0000313|EMBL:AHF86236.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhiz
SCNpilot_cont_300_bf_scaffold_737_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8101..9381)
DNA (1281bp) protein (427aa)
Polyhydroxyalkanoate depolymerase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFJ2_RHITR
polyhydroxyalkanoate depolymerase
Polyhydroxyalkanoate depolymerase {ECO:0000313|EMBL:AGB69451.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobiu
SCNpilot_cont_300_bf_scaffold_737_11
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9630..11039)
DNA (1410bp) protein (470aa)
UPI0003CFDDE1 related cluster n=1 Tax=unknown RepID=UPI0003CFDDE1
Amino acid decarboxylase {ECO:0000313|EMBL:KDP76554.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="
pyridoxal-dependent decarboxylase
SCNpilot_cont_300_bf_scaffold_737_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11130..12083)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LDJ2_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB69448.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_737_13
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12304..12903
DNA (600bp) protein (200aa)
NAD(P)H-flavin oxidoreductase n=1 Tax=Rhizobium sp. RepID=L0NKG8_RHISP
nitroreductase family protein
Nitroreductase family protein {ECO:0000313|EMBL:AHK42860.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" so
SCNpilot_cont_300_bf_scaffold_737_14
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13029..15464)
DNA (2436bp) protein (812aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1510041 species="Bacteria; P
gyrB1; DNA gyrase subunit B (EC:5.99.1.3) rbh
DNA gyrase subunit B n=4 Tax=Rhizobium/Agrobacterium group RepID=U4Q377_9RHIZ rbh
SCNpilot_cont_300_bf_scaffold_737_15
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15614..15979)
DNA (366bp) protein (122aa)
Transcriptional regulator n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JXU9_AGRVS
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ACM34979.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
SCNpilot_cont_300_bf_scaffold_737_16
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15976..16527)
DNA (552bp) protein (184aa)
DNA repair protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000367E0A1
DNA repair protein
DNA repair protein {ECO:0000313|EMBL:AHF86229.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rh
SCNpilot_cont_300_bf_scaffold_737_17
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16532..17650)
DNA (1119bp) protein (373aa)
Membrane-bound lytic murein transglycosylase n=1 Tax=Rhizobium sp. AP16 RepID=J2WDV8_9RHIZ
Putative membrane-bound lytic murein transglycosylase A {ECO:0000313|EMBL:GAJ95693.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agroba
membrane-bound lytic murein transglycosylase
SCNpilot_cont_300_bf_scaffold_737_18
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17647..18354)
DNA (708bp) protein (236aa)
calcium-binding protein n=1 Tax=Rhizobium sp. JGI 0001005-H05 RepID=UPI000363216E
putative translocase transmembrane protein
Putative translocase transmembrane protein {ECO:0000313|EMBL:CDM55699.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
SCNpilot_cont_300_bf_scaffold_737_19
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18488..18994
DNA (507bp) protein (169aa)
FxsA cytoplasmic membrane protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LH90_RHITR
FxsA cytoplasmic membrane protein
FxsA cytoplasmic membrane protein {ECO:0000313|EMBL:AGB69440.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobiu
SCNpilot_cont_300_bf_scaffold_737_20
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19109..19567
DNA (459bp) protein (153aa)
Protein-export protein SecB n=1 Tax=Rhizobium sp. CF080 RepID=J2TML4_9RHIZ
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium
secB; Protein-export protein SecB
SCNpilot_cont_300_bf_scaffold_737_21
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19639..20340)
DNA (702bp) protein (234aa)
DNA polymerase III, epsilon subunit n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BQV9_RHILV rbh
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EJC68725.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizob
DNA polymerase III subunit epsilon rbh
SCNpilot_cont_300_bf_scaffold_737_22
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20342..20944)
DNA (603bp) protein (201aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376, ECO:0000313|EMBL:CDN56309.1}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID
Dephospho-CoA kinase n=1 Tax=Rhizobium sp. RepID=L0NL69_RHISP
Dephospho-CoA kinase
SCNpilot_cont_300_bf_scaffold_737_23
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20941..21795)
DNA (855bp) protein (285aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
Shikimate dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFH6_RHITR
aroE; shikimate 5-dehydrogenase
SCNpilot_cont_300_bf_scaffold_737_24
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21788..22390)
DNA (603bp) protein (201aa)
Maf-like protein REMIM1_CH00002 n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5RS36_RHIET
Maf-like protein FA04_17455 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" s
Maf-like protein
SCNpilot_cont_300_bf_scaffold_737_25
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22427..23248)
DNA (822bp) protein (274aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00
Putative pyruvate, phosphate dikinase regulatory protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CQB9_RHILT
hypothetical protein
SCNpilot_cont_300_bf_scaffold_737_26
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23632..24684
DNA (1053bp) protein (351aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
Uroporphyrinogen decarboxylase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U1Q4_9RHIZ
hemE; uroporphyrinogen decarboxylase
SCNpilot_cont_300_bf_scaffold_737_27
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24681..25217
DNA (537bp) protein (179aa)
membrane protein n=1 Tax=Rhizobium giardinii RepID=UPI000364C8BA
Uncharacterized protein {ECO:0000313|EMBL:EJZ20800.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_737_28
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25405..26229
DNA (825bp) protein (275aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=363754 specie
Transcription termination factor Rho n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UU29_9RHIZ
rho; transcription termination factor Rho
SCNpilot_cont_300_bf_scaffold_737_29
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26205..26630
DNA (426bp) protein (142aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1416753 speci
Transcription termination factor Rho n=1 Tax=Rhizobium sp. CF142 RepID=J2LBG6_9RHIZ
rho; transcription termination factor Rho
SCNpilot_cont_300_bf_scaffold_737_30
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26701..28005
DNA (1305bp) protein (435aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizo
tRNA modification GTPase MnmE n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JEW4_AGRRK
trmE; tRNA modification GTPase TrmE
Displaying items 1-30 of 39 in total

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