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SCNpilot_cont_300_bf_scaffold_869

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_869_1
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..758
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003678F13
Alpha/beta hydrolase {ECO:0000313|EMBL:KHD31637.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitr
alpha/beta hydrolase
SCNpilot_cont_300_bf_scaffold_869_2
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

850..1368
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I8H5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB07980.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
SCNpilot_cont_300_bf_scaffold_869_3
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1355..2911)
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1X3H5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ERI15354.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ1
SCNpilot_cont_300_bf_scaffold_869_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3274..3558)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URI1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80944.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
SCNpilot_cont_300_bf_scaffold_869_5
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3709..4800
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2CWW0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJK81634.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_869_6
unknown

Not on your lists

4852..5199
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_869_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5244..5933)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002DFDB2D
yecA family protein
YecA family protein {ECO:0000313|EMBL:ABJ06224.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas pal
SCNpilot_cont_300_bf_scaffold_869_8
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5875..6921)
DNA (1047bp) protein (349aa)
Transposase n=2 Tax=Azospirillum sp. (strain B510) RepID=D3NYE3_AZOS1
transposase
Transposase {ECO:0000313|EMBL:BAI73422.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B5
SCNpilot_cont_300_bf_scaffold_869_9
unknown

Not on your lists

7156..7494
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_869_10
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7535..7882)
DNA (348bp) protein (116aa)
Transposase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P0H2_AZOS1
transposase
Transposase {ECO:0000313|EMBL:BAI74151.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B5
SCNpilot_cont_300_bf_scaffold_869_11
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7879..8292)
DNA (414bp) protein (138aa)
Transposase n=1 Tax=Pseudomonas sp. K-62 RepID=I2FG34_9PSED
Transposase {ECO:0000313|EMBL:KGT79583.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
Putative transposase
SCNpilot_cont_300_bf_scaffold_869_12
unknown

Not on your lists

8534..8812
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_869_13
Methylocystis parvus, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8797..9279)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002EF51A2
SCNpilot_cont_300_bf_scaffold_869_14
unknown

Not on your lists

comp(9381..9881)
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_869_15
bacterium YEK0313, Bacteria

Not on your lists

comp(9973..10587)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CEY2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CEJ12174.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Hypothetical protein
SCNpilot_cont_300_bf_scaffold_869_16
bacterium YEK0313, Bacteria

Not on your lists

10675..11715
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037D7E22 rbh
HTH-type transcriptional regulator GltC {ECO:0000313|EMBL:CEJ16015.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_869_17
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11712..11930)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003745B11
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG08244.1}; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospi
SCNpilot_cont_300_bf_scaffold_869_18
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11932..13185)
DNA (1254bp) protein (418aa)
Conjugal transfer protein TraI n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HQP6_9SPHN rbh
Conjugal transfer protein TraI {ECO:0000313|EMBL:EQB01650.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
Conjugation TrbI family protein
SCNpilot_cont_300_bf_scaffold_869_19
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13182..14207)
DNA (1026bp) protein (342aa)
Conjugative transfer protein TrbG n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GD03_9SPHN rbh
Conjugative transfer protein TrbG {ECO:0000313|EMBL:EQB01651.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphin
P-type conjugative transfer protein TrbG
SCNpilot_cont_300_bf_scaffold_869_20
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14204..14887)
DNA (684bp) protein (228aa)
Conjugal transfer protein TrbF n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GLT1_9SPHN rbh
Conjugal transfer protein TrbF {ECO:0000313|EMBL:EQB01652.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
conjugal transfer protein TrbF
SCNpilot_cont_300_bf_scaffold_869_21
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14890..16272)
DNA (1383bp) protein (461aa)
P-type conjugative transfer protein TrbL n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJN5_XANP2 rbh
conjugal transfer protein TrbL rbh
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:ABS68228.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xant
SCNpilot_cont_300_bf_scaffold_869_22
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16274..16681)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0G727_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99580.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium qui
trbK; entry exclusion protein TrbK
SCNpilot_cont_300_bf_scaffold_869_23
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16696..17454)
DNA (759bp) protein (253aa)
Conjugal transfer protein TrbJ n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GFY7_9SPHN rbh
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:EQA99581.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
trbJ; conjugal transfer protein TrbJ
SCNpilot_cont_300_bf_scaffold_869_24
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17451..19889)
DNA (2439bp) protein (813aa)
Conjugal transfer protein TrbE n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GHS2_9SPHN rbh
Conjugal transfer protein TrbE {ECO:0000313|EMBL:EQA99582.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
virB4; type IV secretory pathway VirB4 component
SCNpilot_cont_300_bf_scaffold_869_25
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19903..21435)
DNA (1533bp) protein (511aa)
Conjugal transfer protein TrbB n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0G733_9SPHN
Conjugal transfer protein TrbB {ECO:0000313|EMBL:EQA99585.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
P-type conjugative transfer ATPase TrbB
SCNpilot_cont_300_bf_scaffold_869_26
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21685..22098
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLX4_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62773.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_869_27
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22210..22890
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMI1_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS69224.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrop
SCNpilot_cont_300_bf_scaffold_869_28
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22887..23321)
DNA (435bp) protein (145aa)
CopG family transcripitonal regulator n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GHS7_9SPHN
CopG family transcripitonal regulator {ECO:0000313|EMBL:EQA99587.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="S
hypothetical protein
SCNpilot_cont_300_bf_scaffold_869_29
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23327..25318)
DNA (1992bp) protein (664aa)
Conjugal transfer protein TraG n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HPV4_9SPHN rbh
Conjugal transfer protein TraG {ECO:0000313|EMBL:EQA99588.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
virD4; type IV secretory pathway VirD4 component rbh
SCNpilot_cont_300_bf_scaffold_869_30
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25348..25641)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCY8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37470.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
Displaying items 1-30 of 70 in total

View Taxonomy