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SCNpilot_cont_300_bf_scaffold_966

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_966_1
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..956
DNA (954bp) protein (318aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
serine hydroxymethyltransferase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037494F9
SCNpilot_cont_300_bf_scaffold_966_2
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

960..1439
DNA (480bp) protein (160aa)
Transcriptional repressor NrdR n=2 Tax=Rhizobium radiobacter RepID=F7UAS8_RHIRD
NrdR family transcriptional regulator
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/
SCNpilot_cont_300_bf_scaffold_966_3
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1475..2530
DNA (1056bp) protein (352aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Rhizobium sp. RepID=L0NCS9_RHISP rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizob
ribD; riboflavin biosynthesis protein RibD
SCNpilot_cont_300_bf_scaffold_966_4
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2531..3253
DNA (723bp) protein (241aa)
ribE; riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase protein, alpha chain {ECO:0000313|EMBL:ACE90559.1}; EC=2.5.1.9 {ECO:0000313|EMBL:ACE90559.1};; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhi
riboflavin synthase subunit alpha n=1 Tax=Rhizobium leguminosarum RepID=UPI00036CCB1B
SCNpilot_cont_300_bf_scaffold_966_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3250..3699
DNA (450bp) protein (150aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UAS4_RHIRD
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
ribH; riboflavin synthase beta chain
SCNpilot_cont_300_bf_scaffold_966_6
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3704..4189
DNA (486bp) protein (162aa)
N utilization substance protein B homolog n=2 Tax=Rhizobium/Agrobacterium group RepID=NUSB_AGRRK
nusB; transcription antitermination protein NusB
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=359 species="Bacteria; Proteoba
SCNpilot_cont_300_bf_scaffold_966_7
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4377..5612
DNA (1236bp) protein (412aa)
MFS permease n=1 Tax=Rhizobium sp. RepID=L0NDG9_RHISP rbh
MFS transporter {ECO:0000313|EMBL:KEQ06891.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhiz
Putative drug transport transmembrane protein
SCNpilot_cont_300_bf_scaffold_966_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5816..7903
DNA (2088bp) protein (696aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LH37_RHITR
V-type H(+)-translocating pyrophosphatase
SCNpilot_cont_300_bf_scaffold_966_9
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7971..8486)
DNA (516bp) protein (172aa)
membrane protein n=1 Tax=Rhizobium RepID=UPI00035E3791
Uncharacterized protein {ECO:0000313|EMBL:GAK69366.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_966_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8705..9253
DNA (549bp) protein (183aa)
ubiquinol-cytochrome C chaperone n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI000382B62A
Uncharacterized protein {ECO:0000313|EMBL:EHH08670.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Ag
hypothetical protein
SCNpilot_cont_300_bf_scaffold_966_11
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9255..9809
DNA (555bp) protein (185aa)
Putative metal-binding protein, possibly nucleic-acid binding protein n=1 Tax=Rhizobium sp. CF122 RepID=J2I3E8_9RHIZ
Putative metal-binding protein, possibly nucleic-acid binding protein {ECO:0000313|EMBL:EJL50355.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rh
hypothetical protein
SCNpilot_cont_300_bf_scaffold_966_12
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9943..10989
DNA (1047bp) protein (349aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QBL7_9RHIZ
glycerol-3-phosphate acyltransferase PlsX
SCNpilot_cont_300_bf_scaffold_966_13
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11008..11979
DNA (972bp) protein (324aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Rhizobium lupini HPC(L) RepID=K5CT77_RHILU rbh
Beta-ketoacyl-acyl-carrier-protein synthase III rbh
SCNpilot_cont_300_bf_scaffold_966_14
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12083..12427
DNA (345bp) protein (115aa)
Integration host factor subunit alpha n=1 Tax=Rhizobium sp. RepID=L0NDP1_RHISP
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=391 species="Bacteria; Proteobacteria;
integration host factor subunit alpha
SCNpilot_cont_300_bf_scaffold_966_15
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12615..13154
DNA (540bp) protein (180aa)
MerR family transcriptional regulator n=1 Tax=Rhizobium mongolense RepID=UPI0003B6C8C0 rbh
MerR family transcriptional regulator protein rbh
MerR family transcriptional regulator protein {ECO:0000313|EMBL:AJD40769.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gr
SCNpilot_cont_300_bf_scaffold_966_16
unknown

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comp(13191..13346)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_966_17
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13470..14108)
DNA (639bp) protein (213aa)
Outer membrane protein n=2 Tax=Rhizobium etli RepID=Q2K636_RHIEC
ropB2; outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGS22728.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_966_18
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14310..14498)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037BE5E3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJL52393.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
SCNpilot_cont_300_bf_scaffold_966_19
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14815..15108)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0ND09_RHISP
Uncharacterized protein {ECO:0000313|EMBL:KGD99310.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
SCNpilot_cont_300_bf_scaffold_966_20
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15105..16310)
DNA (1206bp) protein (402aa)
Putative glycosyltransferase protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3U6_9RHIZ rbh
Putative glycosyltransferase protein {ECO:0000313|EMBL:EYR81352.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD
glycosyltransferase
SCNpilot_cont_300_bf_scaffold_966_21
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16307..17554)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F1X7_9RHIZ rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHS53314.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
SCNpilot_cont_300_bf_scaffold_966_22
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17551..19116)
DNA (1566bp) protein (522aa)
Predicted glycosyl transferase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MA20_RHISN rbh
UDP-phosphate glucose phosphotransferase {ECO:0000313|EMBL:KDP70959.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ens
putative glycosyl transferase rbh
SCNpilot_cont_300_bf_scaffold_966_23
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19252..20406)
DNA (1155bp) protein (385aa)
Glycosyltransferase n=1 Tax=Rhizobium sp. CF080 RepID=J2IN88_9RHIZ rbh
Glycosyltransferase, family 1
Glycosyltransferase, family 1 {ECO:0000313|EMBL:CDN47338.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;"
SCNpilot_cont_300_bf_scaffold_966_24
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20413..20988)
DNA (576bp) protein (192aa)
Polysaccharide export system protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JD08_AGRRK
polysaccharide export system protein
Periplasmic protein involved in polysaccharide export {ECO:0000313|EMBL:EJK85550.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae;
SCNpilot_cont_300_bf_scaffold_966_25
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21169..23322
DNA (2154bp) protein (718aa)
Polysaccharide synthesis/transport transmembrane protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JD09_AGRRK
Succinoglycan biosynthesis transport protein ExoP {ECO:0000313|EMBL:EYR81347.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Sh
polysaccharide synthesis/transport transmembrane protein
SCNpilot_cont_300_bf_scaffold_966_26
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23289..24515)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JVB4_AGRVS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM36194.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" s
SCNpilot_cont_300_bf_scaffold_966_27
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(24635..24847)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NF64_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF18962.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="
hypothetical protein
SCNpilot_cont_300_bf_scaffold_966_28
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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24978..26060
DNA (1083bp) protein (361aa)
Heme A synthase {ECO:0000256|HAMAP-Rule:MF_01665}; Short=HAS {ECO:0000256|HAMAP-Rule:MF_01665};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_01665};; Cytochrome aa3-controlling protein {ECO:0000256|HAMAP-Ru
heme A synthase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003667C3C rbh
putative cytochrome oxidase assembly protein rbh
SCNpilot_cont_300_bf_scaffold_966_29
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25936..26886)
DNA (951bp) protein (317aa)
Streptomycin 3''-kinase Str n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3V5_9RHIZ rbh
Streptomycin resistance protein {ECO:0000313|EMBL:KGD99320.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium
Streptomycin phosphotransferase
SCNpilot_cont_300_bf_scaffold_966_30
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26886..28781)
DNA (1896bp) protein (632aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110, ECO:0000256|SAAS:SAAS00015955}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0111
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CH76_RHILT
Displaying items 1-30 of 58 in total

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