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SCNpilot_cont_300_bf_scaffold_2262

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2262_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..248
DNA (246bp) protein (82aa)
heat shock protein Hsp20 n=1 Tax=Rhizobium leguminosarum RepID=UPI0003727457
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:ACS54322.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
SCNpilot_cont_300_bf_scaffold_2262_2
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

295..552
DNA (258bp) protein (86aa)
Putative small protein n=1 Tax=Rhizobium sp. CF080 RepID=J2SM82_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGD86454.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
Uncharacterized small protein
SCNpilot_cont_300_bf_scaffold_2262_3
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(688..1392)
DNA (705bp) protein (235aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; t
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Rhizobium sp. RepID=L0NAK5_RHISP rbh
TRNA(m7G46)-methyltransferase rbh
SCNpilot_cont_300_bf_scaffold_2262_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1401..2639)
DNA (1239bp) protein (413aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiace
S-adenosylmethionine synthase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0KWZ5_RHILT
S-adenosylmethionine synthetase
SCNpilot_cont_300_bf_scaffold_2262_5
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2869..3288)
DNA (420bp) protein (140aa)
XRE family transcriptional regulator protein n=2 Tax=Rhizobium etli RepID=S5RYS1_RHIET
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:KEQ04608.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; R
XRE family transcriptional regulator protein
SCNpilot_cont_300_bf_scaffold_2262_6
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3573..5156)
DNA (1584bp) protein (528aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00250216}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF
Apolipoprotein N-acyltransferase n=2 Tax=Rhizobium/Agrobacterium group RepID=LNT_AGRRK
lnt; apolipoprotein N-acyltransferase
SCNpilot_cont_300_bf_scaffold_2262_7
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5244..6344)
DNA (1101bp) protein (367aa)
CBS domain-containing protein n=1 Tax=Rhizobium sp. CF122 RepID=J3BT52_9RHIZ
Hemolysin {ECO:0000313|EMBL:KGD86459.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium
CBS domain-containing protein
SCNpilot_cont_300_bf_scaffold_2262_8
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6357..6863)
DNA (507bp) protein (169aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1532558 species="Bacteria; P
Endoribonuclease YbeY n=1 Tax=Rhizobium sp. CF080 RepID=J2KCI8_9RHIZ
Probable rRNA maturation factor
SCNpilot_cont_300_bf_scaffold_2262_9
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6882..7928)
DNA (1047bp) protein (349aa)
Phosphate starvation-inducible protein, PhoH-like protein n=1 Tax=Rhizobium sp. RepID=L0NA05_RHISP rbh
Phosphate starvation-inducible protein, PhoH-like protein {ECO:0000313|EMBL:CCF17755.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobact
Phosphate starvation inducible protein rbh
SCNpilot_cont_300_bf_scaffold_2262_10
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8037..9389)
DNA (1353bp) protein (451aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000255|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000255|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000372F841
(dimethylallyl)adenosine tRNA methylthiotransferase
SCNpilot_cont_300_bf_scaffold_2262_11
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9439..9609)
DNA (171bp) protein (57aa)
olsA; phospholipid/glycerol acyltransferase (EC:2.3.1.51)
Phospholipid/glycerol acyltransferase n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PC68_9RHIZ
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:CCM74146.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi
SCNpilot_cont_300_bf_scaffold_2262_12
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9585..10196)
DNA (612bp) protein (204aa)
olsA; phospholipid/glycerol acyltransferase (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003630BFC
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:CCM74146.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi
SCNpilot_cont_300_bf_scaffold_2262_13
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10210..10638)
DNA (429bp) protein (143aa)
Fur family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00035CF88A
Fur family transcriptional regulator
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:EJC74544.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizob
SCNpilot_cont_300_bf_scaffold_2262_14
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10683..11177)
DNA (495bp) protein (165aa)
Ribosomal-protein-alanine N-acetyltransferase protein {ECO:0000313|EMBL:CCM74148.1}; EC=2.3.1.128 {ECO:0000313|EMBL:CCM74148.1};; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria;
rimI; ribosomal-protein-alanine N-acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine N-acetyltransferase protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PJR8_9RHIZ
SCNpilot_cont_300_bf_scaffold_2262_15
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11240..11899)
DNA (660bp) protein (220aa)
O-sialoglycoprotein endopeptidase n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00037957AF
O-sialoglycoprotein endopeptidase {ECO:0000313|EMBL:EPR18429.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobac
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2262_16
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11925..12488)
DNA (564bp) protein (188aa)
Scaffold protein Nfu/NifU n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F721_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF60347.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
putative Nfu/NifU scaffold protein
SCNpilot_cont_300_bf_scaffold_2262_17
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12646..13083)
DNA (438bp) protein (146aa)
Universal stress UspA-like protein n=2 Tax=Rhizobium etli RepID=S5SDI0_RHIET
universal stress UspA-like protein
Universal stress UspA-like protein {ECO:0000313|EMBL:AGS20252.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizob
SCNpilot_cont_300_bf_scaffold_2262_18
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13148..14320)
DNA (1173bp) protein (391aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
trpS; Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Rhizobium lupini HPC(L) RepID=K5D0L9_RHILU rbh
SCNpilot_cont_300_bf_scaffold_2262_19
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14382..15425)
DNA (1044bp) protein (348aa)
Multidrug transporter MurJ n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YSE8_9RHIZ
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum s
mviN; integral membrane protein MviN
Displaying 19 items

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