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SCNpilot_cont_300_bf_scaffold_2506

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2506_1
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..356
DNA (354bp) protein (118aa)
Single-stranded DNA-binding protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A741_9SPHN
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=529 species="Bacteria; Proteobacteria; Alphapr
ssb; single-stranded DNA-binding family protein
SCNpilot_cont_300_bf_scaffold_2506_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

495..746
DNA (252bp) protein (84aa)
XRE family transcriptional regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489C58
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67728.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
SCNpilot_cont_300_bf_scaffold_2506_3
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

886..1149
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1ND21_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EAT08719.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2506_4
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1309..2088
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0H990_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB08678.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium qui
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_2506_5
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2209..2475
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Sphingomonadaceae RepID=A5VCL2_SPHWW
hypothetical protein
Transcriptional regulator {ECO:0000313|EMBL:EQB12137.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium l
SCNpilot_cont_300_bf_scaffold_2506_6
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2482..3375
DNA (894bp) protein (298aa)
RepA replication protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037DE470 rbh
RepA replication protein {ECO:0000313|EMBL:EQB12136.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium la
plasmid replication initiator-like protein
SCNpilot_cont_300_bf_scaffold_2506_7
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3813..4085
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HI09_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11773.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lac
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2506_8
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4314..4607
DNA (294bp) protein (98aa)
Conjugal transfer protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IR48_9SPHN
Conjugal transfer protein {ECO:0000313|EMBL:EQB12134.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium l
Type IV secretory pathway protease TraF-like protein
SCNpilot_cont_300_bf_scaffold_2506_9
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4588..4914
DNA (327bp) protein (109aa)
UPI0003D6395F related cluster n=1 Tax=unknown RepID=UPI0003D6395F
Uncharacterized protein {ECO:0000313|EMBL:ETI62654.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2506_10
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4914..5648
DNA (735bp) protein (245aa)
Lytic transglycosylase n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HGI8_9SPHN
Lytic transglycosylase {ECO:0000313|EMBL:EQB12132.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lact
lytic transglycosylase subunit
SCNpilot_cont_300_bf_scaffold_2506_11
unknown

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comp(5662..5931)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2506_12
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6303..8033
DNA (1731bp) protein (577aa)
Type IV secretory pathway VirD2 components (Relaxase)-like protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCL8_SPHWW rbh
Type IV secretory pathway VirD2 components (Relaxase)-like protein {ECO:0000313|EMBL:ABQ70034.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace
Type IV secretory pathway VirD2 components (relaxase)-like protein
SCNpilot_cont_300_bf_scaffold_2506_13
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8054..10072
DNA (2019bp) protein (673aa)
Conjugal transfer protein TraG n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HI04_9SPHN rbh
Conjugal transfer protein TraG {ECO:0000313|EMBL:EQB11768.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
conjugal transfer coupling protein TraG
SCNpilot_cont_300_bf_scaffold_2506_14
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10069..10488
DNA (420bp) protein (140aa)
CopG family transcripitonal regulator n=2 Tax=Sphingomonadaceae RepID=T0IR44_9SPHN
hypothetical protein
CopG family transcripitonal regulator {ECO:0000313|EMBL:EQB12129.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="S
SCNpilot_cont_300_bf_scaffold_2506_15
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10629..11615
DNA (987bp) protein (329aa)
UPI0003D63528 related cluster n=1 Tax=unknown RepID=UPI0003D63528 rbh
Conjugal transfer protein TrbB {ECO:0000313|EMBL:ETI62665.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
conjugal transfer protein TrbB
SCNpilot_cont_300_bf_scaffold_2506_16
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11612..11962
DNA (351bp) protein (117aa)
Conjugal transfer protein TrbC n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S3U0_9SPHN
conjugal transfer protein TrbC
Conjugal transfer protein TrbC {ECO:0000313|EMBL:AGH50436.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
SCNpilot_cont_300_bf_scaffold_2506_17
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12237..14657
DNA (2421bp) protein (807aa)
UPI0003D67AA4 related cluster n=1 Tax=unknown RepID=UPI0003D67AA4
Conjugal transfer protein TrbE {ECO:0000313|EMBL:ETI62668.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
conjugal transfer protein TrbE
SCNpilot_cont_300_bf_scaffold_2506_18
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14654..15370
DNA (717bp) protein (239aa)
Conjugal transfer protein TrbJ n=1 Tax=Sphingobium lactosutens DS20 RepID=T0H607_9SPHN rbh
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:EQB11751.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
conjugal transfer protein TrbJ
SCNpilot_cont_300_bf_scaffold_2506_19
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15378..15644
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IJ46_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11750.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lac
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2506_20
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15641..16510
DNA (870bp) protein (290aa)
Conjugal transfer protein TrbL n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IQ25_9SPHN
Conjugal transfer protein TrbL {ECO:0000313|EMBL:EQB11749.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
conjugal transfer protein TrbL
Displaying 20 items

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