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SCNpilot_cont_300_bf_scaffold_2709

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2709_1
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..351
DNA (351bp) protein (117aa)
PKHD-type hydroxylase VY88_15265 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillal
PKHD-type hydroxylase AZOLI_p20483 n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZDL7_AZOL4
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2709_2
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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773..934
DNA (162bp) protein (54aa)
lldD; L-lactate dehydrogenase (EC:1.1.2.3)
Dehydrogenase, FMN-dependent n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A542_9PROT
Dehydrogenase, FMN-dependent {ECO:0000313|EMBL:EHL97769.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" s
SCNpilot_cont_300_bf_scaffold_2709_3
Rhizobium lupini, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1109..1387)
DNA (279bp) protein (93aa)
Histone family protein DNA-binding protein n=1 Tax=Rhizobium lupini HPC(L) RepID=K5CZC1_RHILU
Histone family protein DNA-binding protein {ECO:0000313|EMBL:EKJ95091.1}; TaxID=1229491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group
DNA-binding protein HU-beta
SCNpilot_cont_300_bf_scaffold_2709_4
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1808..2323
DNA (516bp) protein (172aa)
NTP pyrophosphohydrolase n=1 Tax=Rhizobium sp. CF080 RepID=J2HSV2_9RHIZ
NUDIX hydrolase {ECO:0000313|EMBL:EUB96314.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhiz
NTP pyrophosphohydrolase, MutT family
SCNpilot_cont_300_bf_scaffold_2709_5
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2466..2705)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TGZ4_RICCO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM61148.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_2709_6
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2865..3287)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037692B2
putative small integral membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CCE99814.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
SCNpilot_cont_300_bf_scaffold_2709_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3356..3949)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHD6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR78018.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
membrane protein
SCNpilot_cont_300_bf_scaffold_2709_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3973..4290)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXF0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR78017.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2709_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4604..5563)
DNA (960bp) protein (320aa)
ABC transporter, substrate binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D531_9RHIZ rbh
ABC transporter, substrate binding protein {ECO:0000313|EMBL:EYR83803.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella
Putative ABC transporter (substrate-binding protein)
SCNpilot_cont_300_bf_scaffold_2709_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5582..6448)
DNA (867bp) protein (289aa)
Manganese transport system membrane protein MntC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW55_9RHIZ rbh
Manganese transport system membrane protein MntC {ECO:0000313|EMBL:EYR83804.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shi
iron ABC transporter membrane spanning protein
SCNpilot_cont_300_bf_scaffold_2709_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6441..7217)
DNA (777bp) protein (259aa)
Manganese transport system ATP-binding protein MntB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CG41_9RHIZ rbh
Manganese transport system ATP-binding protein MntB {ECO:0000313|EMBL:EYR83805.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="
metal transport system ATP-binding protein rbh
SCNpilot_cont_300_bf_scaffold_2709_12
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7451..7864
DNA (414bp) protein (138aa)
Putative zinc uptake regulation protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW60_9RHIZ
Fur family transcriptional regulator {ECO:0000313|EMBL:KGD99605.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhiz
zur; zinc uptake regulation protein
SCNpilot_cont_300_bf_scaffold_2709_13
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7936..8181
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00036554B0
4-hydroxytetrahydrobiopterin dehydratase {ECO:0000313|EMBL:KJF66919.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
putative cobalamin biosynthesis protein
Displaying 13 items

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