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SCNpilot_cont_300_bf_scaffold_8660

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_8660_1
unknown

Not on your lists

337..609
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_8660_2
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(628..996)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003812518
Uncharacterized protein {ECO:0000313|EMBL:EMS41032.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
Response regulator receiver protein
SCNpilot_cont_300_bf_scaffold_8660_3
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1297..2793)
DNA (1497bp) protein (499aa)
Uncharacterized protein y4jD n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X451_RHIFR rbh
hypothetical protein rbh
Uncharacterized protein y4jD {ECO:0000313|EMBL:AFL50657.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
SCNpilot_cont_300_bf_scaffold_8660_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2865..3635)
DNA (771bp) protein (257aa)
Putative transposase Genetic Information Processing n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V5U6_9RHIZ
Putative transposase Genetic Information Processing {ECO:0000313|EMBL:ENN86432.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteri
transposase number 2 for insertion sequence
SCNpilot_cont_300_bf_scaffold_8660_5
unknown

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comp(3808..3993)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_8660_6
Ochrobactrum sp. SJY1, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4088..4348)
DNA (261bp) protein (87aa)
Transposase IS66 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CC05_9RHIZ
Mobile element protein {ECO:0000313|EMBL:AIH15786.1}; TaxID=1526653 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. SJY1.;"
transposase
SCNpilot_cont_300_bf_scaffold_8660_7
Shinella sp. HZN7, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4291..4764)
DNA (474bp) protein (158aa)
Transposase IS66 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CC05_9RHIZ
Putative transposase {ECO:0000313|EMBL:AGS16701.1}; TaxID=879274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. HZN7.;"
IS66 family transposase
SCNpilot_cont_300_bf_scaffold_8660_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4928..5152)
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:EYR82776.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_cont_300_bf_scaffold_8660_9
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5168..6157)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F2V6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EHS52934.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_8660_10
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6390..7274
DNA (885bp) protein (295aa)
Transcriptional regulator, AraC family n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F2V5_9RHIZ rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EHS52933.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rh
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_8660_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7381..8130
DNA (750bp) protein (250aa)
Putative transporter protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EYH6_9RHIZ
Major facilitator superfamily {ECO:0000313|EMBL:EYR82828.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
MFS transporter
SCNpilot_cont_300_bf_scaffold_8660_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8150..8524
DNA (375bp) protein (125aa)
Putative transporter protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBW3_9RHIZ
Major facilitator superfamily {ECO:0000313|EMBL:EYR82828.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative transporter protein
SCNpilot_cont_300_bf_scaffold_8660_13
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9061..9963
DNA (903bp) protein (301aa)
Transcriptional regulator, AraC family n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F387_9RHIZ rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EHS52797.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rh
transcriptional regulator
Displaying 13 items

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