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SCNpilot_cont_300_bf_scaffold_996_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(3212..3715)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KRS5_MESAW similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 153.0
  • Bit_score: 212
  • Evalue 3.60e-52
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.; similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 158.0
  • Bit_score: 240
  • Evalue 1.30e-60
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 153.0
  • Bit_score: 212
  • Evalue 1.00e-52

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
GTGTCAGAACTACAGCCGAGCGTTGAACTCGCACGGGATGATATCGTCAAGCTCATTCCGGCCTTGCGCGCCTTCGCGCGGACGTTCTGCCGTGATCCGGTCGACGCCGACGATCTCGTGCAGGAAACGCTGGTCAAGGCGCTCGCCAATCTCGACAAGTTCGAGCCGGGAACACGCCTGAAATCCTGGCTGTTCACCATCATGCGCAACACTTTCTATACGCGTGTGAAGATCAGCAGCCGCGAGGTGCCCGGCCTCGAGAACTGCGCCAGCGACAGCTTGAGCCTCGACGCGACCCAGGAATGGAGCGCCCGGGCCCGCGAGGTCGAGGTCGCCTTCAGCAAGCTCGGCGACCAGTATCGCGAGATCCTCACCCTCGTCGTCGTTCTCGGTGAAAGCTACGAGACGGCGGCGGAGATCTGCGATTGCGCGATCGGCACGGTAAAAAGTCGCCTTAATCGCGCCCGCCGGCAATTGTTGCTGGAACTCGGCGAGGAGATCTAG
PROTEIN sequence
Length: 168
VSELQPSVELARDDIVKLIPALRAFARTFCRDPVDADDLVQETLVKALANLDKFEPGTRLKSWLFTIMRNTFYTRVKISSREVPGLENCASDSLSLDATQEWSARAREVEVAFSKLGDQYREILTLVVVLGESYETAAEICDCAIGTVKSRLNRARRQLLLELGEEI*