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SCNpilot_cont_300_bf_scaffold_996

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_996_1
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(220..1197)
DNA (978bp) protein (326aa)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucan
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00037BF035
malto-oligosyltrehalose trehalohydrolase
SCNpilot_cont_300_bf_scaffold_996_2
Pantoea sp. YR343, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1149..1862)
DNA (714bp) protein (238aa)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucan
Malto-oligosyltrehalose trehalohydrolase n=1 Tax=Pantoea sp. YR343 RepID=J3C1P5_9ENTR
treZ; malto-oligosyltrehalose trehalohydrolase
SCNpilot_cont_300_bf_scaffold_996_3
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2158..3012)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z5X4_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS86364.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum li
SCNpilot_cont_300_bf_scaffold_996_4
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3212..3715)
DNA (504bp) protein (168aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KRS5_MESAW
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;
RNA polymerase sigma factor, sigma-70 family
SCNpilot_cont_300_bf_scaffold_996_5
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3874..4263
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036BA694
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD42593.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
SCNpilot_cont_300_bf_scaffold_996_6
unknown

Not on your lists

4409..4582
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_996_7
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4590..5147
DNA (558bp) protein (186aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=450851 sp
Putative 3-methyladenine DNA glycosylase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REY1_PHEZH
DNA-3-methyladenine glycosylase
SCNpilot_cont_300_bf_scaffold_996_8
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5157..5411)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F8Q6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS50800.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
SCNpilot_cont_300_bf_scaffold_996_9
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5589..5828
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000369B320
Uncharacterized protein {ECO:0000313|EMBL:EJL53646.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_996_10
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6026..7501
DNA (1476bp) protein (492aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1144310 species="Bact
Glycogen synthase n=1 Tax=Rhizobium sp. CF080 RepID=J2L2U2_9RHIZ rbh
Starch [bacterial glycogen] synthase
SCNpilot_cont_300_bf_scaffold_996_11
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7570..9609)
DNA (2040bp) protein (680aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=290339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriale
Uncharacterized protein n=1 Tax=Cronobacter sakazakii (strain ATCC BAA-894) RepID=A7MRL1_CROS8 rbh
hypothetical protein
SCNpilot_cont_300_bf_scaffold_996_12
unknown

Not on your lists

10049..10438
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_996_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10551..13481
DNA (2931bp) protein (977aa)
Putative K(+)/H(+) antiporter subunit A/B n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX74_9RHIZ rbh
Putative K(+)/H(+) antiporter subunit A/B {ECO:0000313|EMBL:EYR77493.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella s
phaA; monovalent cation/H+ antiporter subunit A
SCNpilot_cont_300_bf_scaffold_996_14
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13481..13825
DNA (345bp) protein (115aa)
pH adaption potassium efflux system protein n=3 Tax=Agrobacterium RepID=A9CK78_AGRT5
phaC; pH adaption potassium efflux system protein
Putative monovalent cation/H+ antiporter subunit C {ECO:0000313|EMBL:EGL64297.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
SCNpilot_cont_300_bf_scaffold_996_15
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13822..15462
DNA (1641bp) protein (547aa)
Putative K(+)/H(+) antiporter subunit D n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCV4_9RHIZ
Putative K(+)/H(+) antiporter subunit D {ECO:0000313|EMBL:EYR77491.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp.
phaD; multisubunit K+/H+ antiporter subunit D rbh
SCNpilot_cont_300_bf_scaffold_996_16
Agrobacterium sp. H13-3, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15459..15947
DNA (489bp) protein (163aa)
Putative monovalent cation/H+ antiporter subunit E n=2 Tax=Agrobacterium RepID=F0L5Y9_AGRSH
phaE; monovalent cation/H+ antiporter subunit E
Putative monovalent cation/H+ antiporter subunit E {ECO:0000313|EMBL:ADY63442.1}; TaxID=861208 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteriu
SCNpilot_cont_300_bf_scaffold_996_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15944..16225
DNA (282bp) protein (94aa)
Multiple resistance and pH regulation protein F n=2 Tax=Rhodopseudomonas palustris RepID=B3QKI9_RHOPT
phaF; monovalent cation/H+ antiporter subunit F
Multiple resistance and pH regulation protein F {ECO:0000313|EMBL:ACF01638.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; R
SCNpilot_cont_300_bf_scaffold_996_18
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16222..16614
DNA (393bp) protein (131aa)
Putative K(+)/H(+) antiporter subunit G n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX70_9RHIZ
Putative K(+)/H(+) antiporter subunit G {ECO:0000313|EMBL:EYR77488.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp.
Monovalent cation/proton antiporter, MnhG/PhaG subunit
SCNpilot_cont_300_bf_scaffold_996_19
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16714..17646)
DNA (933bp) protein (311aa)
membrane protein n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00035D5DD9 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAK72434.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
conserved membrane protein of unknown function
SCNpilot_cont_300_bf_scaffold_996_20
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17871..18410
DNA (540bp) protein (180aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Rhizobium sp. CF122 RepID=J2I501_9RHIZ
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJL50945.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gro
RNA polymerase sigma factor
SCNpilot_cont_300_bf_scaffold_996_21
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18397..19170
DNA (774bp) protein (258aa)
Putative transmembrane anti-sigma factor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBQ4_9RHIZ rbh
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:EYR78720.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp
anti-sigma factor protein
SCNpilot_cont_300_bf_scaffold_996_22
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19211..19927
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRM2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR78719.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative protein RP147
SCNpilot_cont_300_bf_scaffold_996_23
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20389..20544
DNA (156bp) protein (52aa)
Putative periplasmic ligand-binding sensor protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZP7_STAND
periplasmic ligand-binding sensor protein
Putative periplasmic ligand-binding sensor protein {ECO:0000313|EMBL:ADH91242.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" sourc
SCNpilot_cont_300_bf_scaffold_996_24
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20897..21346
DNA (450bp) protein (150aa)
response regulator n=1 Tax=Rhizobium mongolense RepID=UPI0003B44109
response regulator CheY-like domain-containing protein
Response regulator CheY-like domain-containing protein {ECO:0000313|EMBL:AJD45222.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobac
SCNpilot_cont_300_bf_scaffold_996_25
unknown

Not on your lists

comp(21682..23451)
DNA (1770bp) protein (590aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_996_26
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25668..27044
DNA (1377bp) protein (459aa)
membrane protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000377C5C2
Inner membrane lipoprotein {ECO:0000313|EMBL:KEC79173.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;"
inner membrane lipoprotein
SCNpilot_cont_300_bf_scaffold_996_27
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27051..29135
DNA (2085bp) protein (695aa)
Penicillin-binding protein 1C n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HR94_9RHIZ rbh
Penicillin-binding protein 1C {ECO:0000313|EMBL:EJN03113.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;
penicillin-binding protein 1C
SCNpilot_cont_300_bf_scaffold_996_28
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29141..29812)
DNA (672bp) protein (224aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 (EC:3.1.3.-)
(DL)-glycerol-3-phosphatase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I244_9RHIZ
(DL)-glycerol-3-phosphatase {ECO:0000313|EMBL:EJZ23164.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
SCNpilot_cont_300_bf_scaffold_996_29
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29905..31320)
DNA (1416bp) protein (472aa)
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q113_RHIE6
hypothetical protein
Hypothetical conserved protein {ECO:0000313|EMBL:ACE93369.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;
SCNpilot_cont_300_bf_scaffold_996_30
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31664..32809
DNA (1146bp) protein (382aa)
Sulfur acquisition oxidoreductase, SfnB family n=1 Tax=Rhizobium sp. AP16 RepID=J2WH16_9RHIZ
Sulfur acquisition oxidoreductase, SfnB family {ECO:0000313|EMBL:EJK82148.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium g
FMNH2-dependent monooxygenase
Displaying items 1-30 of 40 in total

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