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SCNpilot_cont_300_bf_scaffold_1216_21

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(21044..21397)

Top 3 Functional Annotations

Value Algorithm Source
binding-protein-dependent transporter inner membrane component; K11070 spermidine/putrescine transport system permease protein id=14628666 bin=bin8_Chloro species=Dehalobacter sp. FTH1 genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 115.0
  • Bit_score: 129
  • Evalue 2.80e-27
binding-protein-dependent transporter inner membrane component; K11070 spermidine/putrescine transport system permease protein Tax=CSP1_4_Chloroflexi similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 115.0
  • Bit_score: 129
  • Evalue 3.00e-27
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 115.0
  • Bit_score: 126
  • Evalue 5.10e-27

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Taxonomy

CSP1_4_Chloroflexi → Gitt-GS-136 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 354
TTGAGCTTCGTCATCATCAACGTGCGCTCGCGCGTCATCGGCGCCGGAGTGACGCTGGAGCAGGCGGCGCGCGATCTCGGCGCCTCCGGCTTCACGGTGTTCCGCACGATCTGGCTACCGATCATCCTGCCGGGCATCCTCTCCGGCGCGCTGCTCACCTTCGCCATCTCGCTCGACGACTTTGTGCTGACCAACTTCACCGCCGGCGGAACGACCATGTTCCCGACCTGGCTTTACGGCCTGATGCGCCGCGAACTGCCGCCGCAGATCGCGGTTGTCGGCACGCTGATCTTCCTCGTGTCAATCGGCCTCGTCGCCCTCGCGGCAAAACTTTTGGGTCGCCGGACGGGCTGA
PROTEIN sequence
Length: 118
LSFVIINVRSRVIGAGVTLEQAARDLGASGFTVFRTIWLPIILPGILSGALLTFAISLDDFVLTNFTAGGTTMFPTWLYGLMRRELPPQIAVVGTLIFLVSIGLVALAAKLLGRRTG*