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SCNpilot_cont_300_bf_scaffold_1216

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1216_1
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5..691)
DNA (687bp) protein (229aa)
FCD domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XIV9_9BURK
FCD domain protein {ECO:0000313|EMBL:EFF73257.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1216_2
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

914..2182
DNA (1269bp) protein (423aa)
acnA4; aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=762376 species="Bacteria; Proteobacteria; Beta
Aconitate hydratase 4 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HKL7_ACHXA
SCNpilot_cont_300_bf_scaffold_1216_3
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2182..3567
DNA (1386bp) protein (462aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1331258 species="Bacteria; Proteobacteria; Bet
acnA1; aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase 1 n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XIV8_9BURK
SCNpilot_cont_300_bf_scaffold_1216_4
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3564..4925
DNA (1362bp) protein (454aa)
Amidohydrolase n=2 Tax=Bordetella holmesii RepID=M5NK47_9BORD rbh
Amidohydrolase family protein {ECO:0000313|EMBL:KCB41270.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinz
amidohydrolase family protein
SCNpilot_cont_300_bf_scaffold_1216_5
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4947..5678
DNA (732bp) protein (244aa)
Isochorismatase family protein {ECO:0000313|EMBL:EFF73254.1}; EC=3.-.-.- {ECO:0000313|EMBL:EFF73254.1};; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligena
Isochorismatase family protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XIV6_9BURK rbh
isochorismatase hydrolase
SCNpilot_cont_300_bf_scaffold_1216_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(5759..6271)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI0003671934
flavin reductase domain-containing protein Tax=CSP1_6_Rokubacteria
flavin reductase
SCNpilot_cont_300_bf_scaffold_1216_7
unknown

Not on your lists

comp(6273..7628)
DNA (1356bp) protein (452aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1216_8
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7876..9078)
DNA (1203bp) protein (401aa)
desulfurization protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628A47
putative desulfurization protein
Putative desulfurization protein {ECO:0000313|EMBL:AIJ25382.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanoli
SCNpilot_cont_300_bf_scaffold_1216_9
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(9103..9588)
DNA (486bp) protein (162aa)
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:KJF16019.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJF16019.1};; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales;
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3ABU9_9SPHN
oligopeptide/dipeptide ABC transporter ATPase
SCNpilot_cont_300_bf_scaffold_1216_10
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9794..10945
DNA (1152bp) protein (384aa)
UPI0003CF4CC1 related cluster n=1 Tax=unknown RepID=UPI0003CF4CC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESY78827.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
SCNpilot_cont_300_bf_scaffold_1216_11
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10927..11715)
DNA (789bp) protein (263aa)
peptide ABC transporter permease n=1 Tax=Nocardiopsis valliformis RepID=UPI00034B930A
N-terminal TM domain of oligopeptide transport permease C family protein
N-terminal TM domain of oligopeptide transport permease C family protein {ECO:0000313|EMBL:AFR07925.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiop
SCNpilot_cont_300_bf_scaffold_1216_12
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11712..12761)
DNA (1050bp) protein (350aa)
peptide ABC transporter permease n=1 Tax=Methyloversatilis universalis RepID=UPI00036A1816
Putative dipeptide transport protein {ECO:0000313|EMBL:EGK72741.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Met
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
SCNpilot_cont_300_bf_scaffold_1216_13
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12736..13428)
DNA (693bp) protein (231aa)
Peptide ABC transporter substrate-binding protein n=1 Tax=Arthrobacter gangotriensis Lz1y RepID=M7MRW1_9MICC
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:EMQ97741.1}; TaxID=1276920 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter ga
ABC-type dipeptide transport system, periplasmic component
SCNpilot_cont_300_bf_scaffold_1216_14
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(13425..14312)
DNA (888bp) protein (296aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3528F
Glutathione-binding protein GsiB {ECO:0000313|EMBL:KJF15555.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix f
putative ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_1216_15
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14571..15296
DNA (726bp) protein (242aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0W271_RHILT
dapB2; dihydrodipicolinate reductase
SCNpilot_cont_300_bf_scaffold_1216_16
unknown

Not on your lists

comp(17060..17383)
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1216_17
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17822..18583)
DNA (762bp) protein (254aa)
histidinol-phosphatase n=1 Tax=Rhizobium leguminosarum RepID=UPI000368D05A rbh
ferric enterobactin ABC transporter ATP-binding protein rbh
Ferric enterobactin ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIC30832.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agroba
SCNpilot_cont_300_bf_scaffold_1216_18
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18580..19620)
DNA (1041bp) protein (347aa)
ABC-type Fe3+-siderophore transport system, permease component n=1 Tax=Rhizobium sp. CF142 RepID=J2KYF5_9RHIZ
ABC-type Fe3+-siderophore transport system, permease component {ECO:0000313|EMBL:EJJ26262.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhiz
ferric enterobactin ABC transporter permease protein
SCNpilot_cont_300_bf_scaffold_1216_19
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19617..20636)
DNA (1020bp) protein (340aa)
ABC transporter substrate-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037AEE93
ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:EJN06755.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; P
periplasmic binding protein
SCNpilot_cont_300_bf_scaffold_1216_20
unknown

Not on your lists

comp(20717..20962)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1216_21
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(21044..21397)
DNA (354bp) protein (118aa)
binding-protein-dependent transporter inner membrane component; K11070 spermidine/putrescine transport system permease protein id=14628666 bin=bin8_Chloro species=Dehalobacter sp. FTH1 genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
binding-protein-dependent transporter inner membrane component; K11070 spermidine/putrescine transport system permease protein Tax=CSP1_4_Chloroflexi
binding-protein-dependent transport systems inner membrane component
SCNpilot_cont_300_bf_scaffold_1216_22
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21460..21831)
DNA (372bp) protein (124aa)
Polyamine ABC transporter integral membrane protein n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RLQ9_MYCPH
ABC transporter permease {ECO:0000313|EMBL:KDF02451.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS1
ABC-type spermidine/putrescine transport system, permease component II
SCNpilot_cont_300_bf_scaffold_1216_23
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(21821..22399)
DNA (579bp) protein (193aa)
binding-protein-dependent transport systems inner membrane component Tax=CSP1_4_Chloroflexi
binding-protein-dependent transport systems inner membrane component id=14628667 bin=bin8_Chloro species=Streptomyces sp. Tu6071 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
binding-protein-dependent transport systems inner membrane component
SCNpilot_cont_300_bf_scaffold_1216_24
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(22799..23920)
DNA (1122bp) protein (374aa)
extracellular solute-binding protein; K11069 spermidine/putrescine transport system substrate-binding protein id=14628668 bin=bin8_Chloro species=Intrasporangium calvum genus=Intrasporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
extracellular solute-binding protein; K11069 spermidine/putrescine transport system substrate-binding protein Tax=CSP1_4_Chloroflexi
ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_1216_25
unknown

Not on your lists

comp(23949..24338)
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1216_26
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24385..25422)
DNA (1038bp) protein (346aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1609135 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Strep
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036C9D8A
spermidine/putrescine ABC transporter ATP-binding subunit
SCNpilot_cont_300_bf_scaffold_1216_27
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25543..26211
DNA (669bp) protein (223aa)
Putative GntR family transcriptional regulator n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WBQ1_9ACTO
GntR family transcriptional regulator
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:GAB91181.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera
SCNpilot_cont_300_bf_scaffold_1216_28
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26229..26948)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EPK7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV06689.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium met
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1216_29
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27083..27943)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EV65_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EBA16435.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1216_30
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28170..29252
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNY243 RepID=UPI00036EFF2B
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:AJY73347.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijinge
Displaying items 1-30 of 40 in total

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