ggKbase home page

SCNpilot_cont_300_bf_scaffold_1162_11

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 8308..8745

Top 3 Functional Annotations

Value Algorithm Source
rnhA; ribonuclease H (EC:3.1.26.4) similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 145.0
  • Bit_score: 282
  • Evalue 5.30e-74
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00 similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 145.0
  • Bit_score: 282
  • Evalue 2.60e-73
Ribonuclease H n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MHK3_RHISN similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 145.0
  • Bit_score: 282
  • Evalue 1.90e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
ATGAAGAAGATCGAGATTTTTACCGACGGCGCCTGCTCGGGCAATCCCGGGCCGGGCGGCTGGGGCGCGGTGCTGCGCTATGGCGATGTCGAAAAGGACATGTTCGGCGGTGAGGCCGGCACCACCAACAATCGCATGGAACTGATGGCGGCGATCTCCGCCCTCAACGCCCTCAAGGCAGCCTGCGACATCGACCTCTATACCGACAGCAAATACGTCATGGACGGCATTTCCAAGTGGATTCACGGCTGGAAACGCAACGGCTGGCGCACCGCGGACAAGAAGCCGGTGAAGAATGGCGAACTCTGGCAGGCGCTCGACGAGGCCACACAGCGGCACACCATCCGCTGGCACTGGGTCAAGGGCCATGCCGGCCACCCGGAAAACGAACGCGCCGACGAACTCGCTCGCAAGGGCATGGAGCCGTTCAAGCGGTGA
PROTEIN sequence
Length: 146
MKKIEIFTDGACSGNPGPGGWGAVLRYGDVEKDMFGGEAGTTNNRMELMAAISALNALKAACDIDLYTDSKYVMDGISKWIHGWKRNGWRTADKKPVKNGELWQALDEATQRHTIRWHWVKGHAGHPENERADELARKGMEPFKR*