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SCNpilot_cont_300_bf_scaffold_1162

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1162_1
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..466
DNA (465bp) protein (155aa)
ctaC; cytochrome c oxidase subunit II (EC:1.9.3.1)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobi
cytochrome C oxidase subunit II n=1 Tax=Rhizobium leguminosarum RepID=UPI000376544A
SCNpilot_cont_300_bf_scaffold_1162_2
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

483..2171
DNA (1689bp) protein (563aa)
ctaD; cytochrome c oxidase subunit I (EC:1.9.3.1) rbh
Cytochrome c oxidase subunit I n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HN15_9RHIZ rbh
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:EPE99445.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;
SCNpilot_cont_300_bf_scaffold_1162_3
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2246..3202
DNA (957bp) protein (319aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
Protoheme IX farnesyltransferase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QVT7_9RHIZ
Heme O synthase
SCNpilot_cont_300_bf_scaffold_1162_4
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3199..3342
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X013_RHIFR
Uncharacterized protein {ECO:0000313|EMBL:KEC81373.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1162_5
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3347..3955
DNA (609bp) protein (203aa)
Cytochrome c oxidase assembly protein CtaG n=1 Tax=Rhizobium sp. (strain NGR234) RepID=COXZ_RHISN
ctaG; cytochrome C oxidase assembly protein
Cytochrome c oxidase assembly protein CtaG {ECO:0000255|HAMAP-Rule:MF_00155}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
SCNpilot_cont_300_bf_scaffold_1162_6
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4068..4868
DNA (801bp) protein (267aa)
Cytochrome c oxidase subunit III n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JT29_AGRVS
coxC; cytochrome c oxidase subunit III
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:ACM35742.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacte
SCNpilot_cont_300_bf_scaffold_1162_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5042..5425
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZSV7_RHILW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI53906.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_1162_8
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5418..6164
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L5W8_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EJJ28907.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
transmembrane cytochrome oxidase complex biogenesis protein
SCNpilot_cont_300_bf_scaffold_1162_9
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6348..7286
DNA (939bp) protein (313aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003709914
SCNpilot_cont_300_bf_scaffold_1162_10
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7343..8308
DNA (966bp) protein (322aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|
Homoserine kinase n=2 Tax=Rhizobium/Agrobacterium group RepID=KHSE_AGRRK
thrB; homoserine kinase
SCNpilot_cont_300_bf_scaffold_1162_11
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8308..8745
DNA (438bp) protein (146aa)
rnhA; ribonuclease H (EC:3.1.26.4)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
Ribonuclease H n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MHK3_RHISN
SCNpilot_cont_300_bf_scaffold_1162_12
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8915..9223
DNA (309bp) protein (103aa)
Stress responsive A/B Barrel Domain-containing protein n=1 Tax=Rhizobium sp. CF080 RepID=J2ILK7_9RHIZ
Stress responsive protein {ECO:0000313|EMBL:KEQ09184.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" so
Stress responsive A/B Barrel Domain-containing protein
SCNpilot_cont_300_bf_scaffold_1162_13
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9305..9790)
DNA (486bp) protein (162aa)
Peroxiredoxin protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JAR0_AGRRK
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KGD86012.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;
peroxiredoxin protein
SCNpilot_cont_300_bf_scaffold_1162_14
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9895..10608)
DNA (714bp) protein (238aa)
Protein involved in C-type cytochrome biogenesis n=1 Tax=Rhizobium sp. CF142 RepID=J2L780_9RHIZ
Protein involved in C-type cytochrome biogenesis {ECO:0000313|EMBL:EJJ28914.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1162_15
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10893..11498
DNA (606bp) protein (202aa)
UPF0301 protein H009_08546 n=2 Tax=Rhizobium radiobacter RepID=M8ABW7_RHIRD rbh
UPF0301 protein BN949_00748 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium
conserved hypothetical protein, hypothetical UPF0301 protein rbh
SCNpilot_cont_300_bf_scaffold_1162_16
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11694..11885
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VKS4_RHILT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJC73926.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_1162_17
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11967..13064
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PTN3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCM74705.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1162_18
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13115..16024)
DNA (2910bp) protein (970aa)
diguanylate cyclase n=1 Tax=Rhizobium mongolense RepID=UPI0003B3BD16
GGDEF/EAL domain-containing protein
GGDEF/EAL domain-containing protein {ECO:0000313|EMBL:AJD40386.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
SCNpilot_cont_300_bf_scaffold_1162_19
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16031..16564)
DNA (534bp) protein (178aa)
Alanine acetyltransferase (Ribosomal) protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JAR6_AGRRK
rimJ; alanine acetyltransferase (ribosomal) protein
Alanine acetyltransferase (Ribosomal) protein {ECO:0000313|EMBL:ACM25749.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gro
SCNpilot_cont_300_bf_scaffold_1162_20
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16669..17976)
DNA (1308bp) protein (436aa)
Peptidase, family M16 protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q1K5_9RHIZ
peptidase, family M16 protein
Peptidase, family M16 protein {ECO:0000313|EMBL:EKF57579.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacteri
SCNpilot_cont_300_bf_scaffold_1162_21
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18001..19398)
DNA (1398bp) protein (466aa)
Threonine synthase {ECO:0000313|EMBL:CCF18256.1}; EC=4.2.3.1 {ECO:0000313|EMBL:CCF18256.1};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agro
Threonine synthase n=1 Tax=Rhizobium sp. RepID=L0NBU0_RHISP rbh
Threonine synthase
SCNpilot_cont_300_bf_scaffold_1162_22
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19712..20290
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MHL2_RHISN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACP24340.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source
SCNpilot_cont_300_bf_scaffold_1162_23
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20304..21230
DNA (927bp) protein (309aa)
putative diacylglycerol kinase catalytic region (EC:2.7.1.-)
Putative Diacylglycerol kinase catalytic region n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PDT3_9RHIZ
Putative Diacylglycerol kinase catalytic region {ECO:0000313|EMBL:CCM74711.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
SCNpilot_cont_300_bf_scaffold_1162_24
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21235..21954)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6Y047_RHIRD
HAD family hydrolase {ECO:0000313|EMBL:KJF73384.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" sou
HAD-superfamily hydrolase, subfamily IA, variant 3
SCNpilot_cont_300_bf_scaffold_1162_25
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22078..22623)
DNA (546bp) protein (182aa)
von willebrand factor type A n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY75_9RHIZ
von willebrand factor type A {ECO:0000313|EMBL:EYR79218.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Von Willebrand factor type A
SCNpilot_cont_300_bf_scaffold_1162_26
unknown

Not on your lists

22736..23752
DNA (1017bp) protein (339aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1162_27
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23807..24937
DNA (1131bp) protein (377aa)
ccrM; modification methylase (EC:2.1.1.72)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobiu
Site-specific DNA-methyltransferase (Adenine-specific) protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3IL12_9RHIZ
SCNpilot_cont_300_bf_scaffold_1162_28
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25125..26936
DNA (1812bp) protein (604aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JT60_AGRVS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACM35773.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" s
SCNpilot_cont_300_bf_scaffold_1162_29
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26997..27608)
DNA (612bp) protein (204aa)
Hydrolase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JT64_AGRVS rbh
hydrolase
Hydrolase {ECO:0000313|EMBL:ACM35777.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobac
SCNpilot_cont_300_bf_scaffold_1162_30
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27612..28715)
DNA (1104bp) protein (368aa)
A/G-specific adenine glycosylase n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JAT1_AGRRK rbh
A/G-specific adenine glycosylase
A/G-specific adenine glycosylase {ECO:0000313|EMBL:CDN53010.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium
Displaying items 1-30 of 43 in total

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