ggKbase home page

SCNpilot_cont_300_bf_scaffold_1668_11

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 10245..12020

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Pseudomonas sp. GM60 RepID=J3H2K2_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 593.0
  • Bit_score: 484
  • Evalue 1.30e-133
oligopeptide/dipeptide ABC transporter ATPase similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 600.0
  • Bit_score: 512
  • Evalue 1.30e-142
Pseudomonas putida strain UASWS0946 Contig145, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53487.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomon similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 585.0
  • Bit_score: 495
  • Evalue 1.40e-136

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1776
ATGGCCGAAATCGCTCCGGCACTTGCCGTCGAGGTTCGCAACCTGCGCATCGACATGCCCGAAGGCGGCGATATCGTCGACGATGTCAGCTTCACCATCCGCGCCGGCGAAGTGCTGGGACTGGTCGGCGAATCCGGCTCGGGCAAGACCACCGTCGGCACGGCGCTGCTCGGCTTTGCCCGCGGCGGCGCCCGCATCGCCGGCGGCACGGTGCATGTCGCGGGCGATAGCTCCGTCAACATGCTCGACCTCACGCCGCAGCAGAAGCGCCGGCTGCGTGGCAAGACCGTCGCCTATGTGCCGCAGGATCCAGCCTCTGCCCTCAATCCGTCGCTGCGGATCGGGCTGCAGCTCTCCGAGGTCATCGAGGCGCACGAGCCCGAAACGCCGCGCGGCGAGATCGATCGCCGCATCGAGGCGGTGATGCAGGATGTCGGCCTGCCCATCGCCATGGCCGTCATCCTCGCACCCAAGCTGATCGTGCTCGACGAGCCGACCACCGGGCTCGACGTCTCAACGCAGAACAGGATCCTCGACATCGTCAAGCGCCTCTGCCGCGAACACGGTATCGGTGCGCTGCATGTCACCCACGATCTTTCCGTCATCGCCCATATCGCCGATCAGGTGATGGTGATGTATTCCGGCCGCGTGGTCGAGATCGGCCGGGTCGAAACCGTGTACGACCAGCCCTGTCATCCCTATACGCAGGCCCTGCTGAGCGCGGTTCCCGAACTGCGTTACCGCACCCAGCTCAAGGCCATTCCGGGCCATGCCGCACGCCCCGGCCAGCGCCCGCAGGGCTGCTTCTTCCAGGCGCGTTGTCCAATCGCCACACAGGAATGCAAGGCACATCCCATCGCAATGACCCGTCAGGACGCGGGACATGACGTCCGCTGCCTGAAATCCGGCGTCACGGCCATCGCCGAGCCGGAGCGACTGCCCGATCCTTTGCCGGCCACCGCGACGAGCGGAAAGCGACCGGTGATCGAGGTTCGCGACCTGCATGTCGCCTACGGCGCCTTCCGGGTGCTCGACGGGGTGGAGTTCACGGTCGAAAAGGGCGAGTGCCTCGCCATCGTCGGCGAATCCGGCTCGGGCAAGAGCACCCTGTCGCGCGCCCTGATCGGGCTGGTGCCGCAGCAGCAATGCACGGCCCTGCTCAATGGCGAGCGGCTGGCGCCGCGCGCCCGCGACCGCAGCCGGCAGCAGCTGCAGACGATGCAATACATCTTCCAGAGCCCGCACAATTCGCTCAATCCGCGGCAGACGGTGGAGAGCATCGTCGGCCTGGTCCACGACACGTTCAACCGCGCCAGCCGCAGCGAGCGGCGGCAGAAGATCGCCGAGGTGCTGAGCCAGGTCGGACTTTCCCCCGATGCGATGTTTGCCTTTCCCGACCAGCTCTCGGGCGGCGAGCGGCAGCGCGTTGCCATCGCCCGCGCCCTGATGGCGGATCCGCAGGTGCTGATCTGCGACGAGATCACCTCGGCGCTCGACGTCTCGGTGCAGGCCGCGATCGTCAACCTGCTCAAGGATCTGCAACAGAGCCGTGGCCTGACGATGGTCTTCGTCACCCACAATCTCGCGCTGGTGCGCAATCTCGCCGACCGTGTCCTCGTCCTCAACCAGGGCAAGGTGGTGGAGATGCGCGGCGTCGCCGAGGTCATCGACACGCCCCGGCACGCTTACACAAAGCAGTTACTCGCCAATGCGCTGGTCGCCGATCTCGACAGCCGCGCCAAGCGCAGCGGCGAAAAGGAATGCCTGCGCGCCTGA
PROTEIN sequence
Length: 592
MAEIAPALAVEVRNLRIDMPEGGDIVDDVSFTIRAGEVLGLVGESGSGKTTVGTALLGFARGGARIAGGTVHVAGDSSVNMLDLTPQQKRRLRGKTVAYVPQDPASALNPSLRIGLQLSEVIEAHEPETPRGEIDRRIEAVMQDVGLPIAMAVILAPKLIVLDEPTTGLDVSTQNRILDIVKRLCREHGIGALHVTHDLSVIAHIADQVMVMYSGRVVEIGRVETVYDQPCHPYTQALLSAVPELRYRTQLKAIPGHAARPGQRPQGCFFQARCPIATQECKAHPIAMTRQDAGHDVRCLKSGVTAIAEPERLPDPLPATATSGKRPVIEVRDLHVAYGAFRVLDGVEFTVEKGECLAIVGESGSGKSTLSRALIGLVPQQQCTALLNGERLAPRARDRSRQQLQTMQYIFQSPHNSLNPRQTVESIVGLVHDTFNRASRSERRQKIAEVLSQVGLSPDAMFAFPDQLSGGERQRVAIARALMADPQVLICDEITSALDVSVQAAIVNLLKDLQQSRGLTMVFVTHNLALVRNLADRVLVLNQGKVVEMRGVAEVIDTPRHAYTKQLLANALVADLDSRAKRSGEKECLRA*