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SCNpilot_cont_300_bf_scaffold_1668

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1668_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1097
DNA (1095bp) protein (365aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhiz
eryB; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3)
Glycerol-3-phosphate dehydrogenase GlpD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C666_9RHIZ
SCNpilot_cont_300_bf_scaffold_1668_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1106..2041
DNA (936bp) protein (312aa)
D-erythrulose-1-phosphate dehydrogenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLZ2_9RHIZ rbh
D-erythrulose-1-phosphate dehydrogenase {ECO:0000313|EMBL:EYR78658.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp.
putative d-erythrulose 4-phosphate dehydrogenase rbh
SCNpilot_cont_300_bf_scaffold_1668_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2101..3051
DNA (951bp) protein (317aa)
Transcriptional regulator LsrR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW22_9RHIZ rbh
Transcriptional regulator LsrR {ECO:0000313|EMBL:EYR78657.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
DeoR family transcriptional regulator protein
SCNpilot_cont_300_bf_scaffold_1668_4
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3330..4004
DNA (675bp) protein (225aa)
Spermidine synthase n=1 Tax=Rhizobium sp. CF080 RepID=J2IF48_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EUB98425.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
Spermidine synthase
SCNpilot_cont_300_bf_scaffold_1668_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4185..5075)
DNA (891bp) protein (297aa)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0WFP7_RHILT
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:EJC84198.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; R
5-carboxymethyl-2-hydroxymuconate delta-isomerase
SCNpilot_cont_300_bf_scaffold_1668_6
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5282..5992
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00030B0A8A
Transcriptional regulator {ECO:0000313|EMBL:EJC84199.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sou
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1668_7
Brucella inopinata, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5987..6397)
DNA (411bp) protein (137aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Brucella inopinata BO1 RepID=E0DPX8_9RHIZ
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:EFM56011.1}; TaxID=470735 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Br
HAD family hydrolase
SCNpilot_cont_300_bf_scaffold_1668_8
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6836..8389
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI00034D5D65
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESX84367.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;"
peptide ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_1668_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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8395..9339
DNA (945bp) protein (315aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8E2_CONWI rbh
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADB49012.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobactera
SCNpilot_cont_300_bf_scaffold_1668_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

9352..10227
DNA (876bp) protein (292aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8E3_CONWI
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADB49013.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacterac
SCNpilot_cont_300_bf_scaffold_1668_11
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10245..12020
DNA (1776bp) protein (592aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Pseudomonas sp. GM60 RepID=J3H2K2_9PSED
oligopeptide/dipeptide ABC transporter ATPase
Pseudomonas putida strain UASWS0946 Contig145, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53487.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomon
SCNpilot_cont_300_bf_scaffold_1668_12
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12337..13614)
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Ruegeria conchae RepID=UPI0002378B6A rbh
Uncharacterized protein {ECO:0000313|EMBL:ERP86473.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1668_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13655..15142)
DNA (1488bp) protein (496aa)
Aldehyde dehydrogenase PuuC {ECO:0000313|EMBL:EYR82559.1}; EC=1.2.1.5 {ECO:0000313|EMBL:EYR82559.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; S
Aldehyde dehydrogenase PuuC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRI1_9RHIZ
aldehyde dehydrogenase
SCNpilot_cont_300_bf_scaffold_1668_14
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15357..16151
DNA (795bp) protein (265aa)
IclR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00036F870A
hypothetical protein
Tax=BJP_IG2158_Rhodobacterales_69_12
SCNpilot_cont_300_bf_scaffold_1668_15
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16184..17554
DNA (1371bp) protein (457aa)
Aminotransferase class-III n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWT2_RHITR
Uncharacterized protein {ECO:0000313|EMBL:KDP76561.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="E
aminotransferase class-III
SCNpilot_cont_300_bf_scaffold_1668_16
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17656..18480
DNA (825bp) protein (275aa)
DNA-binding protein with HTH domain n=1 Tax=Caulobacter sp. AP07 RepID=J2GBV0_9CAUL
DNA-binding protein with HTH domain {ECO:0000313|EMBL:EJL27320.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulo
LuxR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1668_17
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18648..19238
DNA (591bp) protein (197aa)
Lactoylglutathione lyase-like lyase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CWB7_RHILT
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:EJC84200.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizob
SCNpilot_cont_300_bf_scaffold_1668_18

Not on your lists

19262..20488
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003774E5F
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48906.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
acyl-CoA dehydrogenase, type 2, C-terminal domain protein
SCNpilot_cont_300_bf_scaffold_1668_19
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20538..20921
DNA (384bp) protein (128aa)
Uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CKG8_RHILT
Uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein {ECO:0000313|EMBL:EJC84197.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
carboxymuconolactone decarboxylase
SCNpilot_cont_300_bf_scaffold_1668_20
unknown

Not on your lists

21081..21365
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1668_21
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21423..21728)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J3BIL4_9RHIZ
putative conserved protein
Putative conserved protein {ECO:0000313|EMBL:CDM55705.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" so
SCNpilot_cont_300_bf_scaffold_1668_22
Acinetobacter sp. Ver3, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21853..22038)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. ANC 3789 RepID=N8VH31_9GAMM
Flavin reductase {ECO:0000313|EMBL:EZQ07159.1}; TaxID=466088 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. Ver3.;"
flavin reductase domain-containing protein
Displaying 22 items

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