ggKbase home page

SCNpilot_cont_300_bf_scaffold_1668_16

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 17656..18480

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein with HTH domain n=1 Tax=Caulobacter sp. AP07 RepID=J2GBV0_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 35.1
  • Coverage: 268.0
  • Bit_score: 163
  • Evalue 4.10e-37
DNA-binding protein with HTH domain {ECO:0000313|EMBL:EJL27320.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulo similarity UNIPROT
DB: UniProtKB
  • Identity: 35.1
  • Coverage: 268.0
  • Bit_score: 163
  • Evalue 5.70e-37
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 28.5
  • Coverage: 263.0
  • Bit_score: 89
  • Evalue 1.60e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caulobacter sp. AP07 → Caulobacter → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGGAATTGCTTGATGCAATCGAGCCCGTCGGCGAGATGGTGTCGCTGATCGGCTCGCGCGACTTCGGGGCCGGCTTCTATCGCATTGCCAACGAGCTGATCGGCATCGACCATTGCACCGTCTTCATGTGCGCCAACGACAATCCGCGAACGCTGGTCGCGGAGGCCAATTGCGAGAAGACCGCCGCGCGCGTGCGTTCGCTCGCCGATATCTACATCCGCGAGGCCTATGTGCAGGACCCGGTCTGGGGCACGTTCCAGAGCGCGCCGCATGCAGGCTGCTCCACCTTCCTTCTGTCGCCGACCGAGCTTGCCGACGAGGGATACCGCCGCGAATTCTACGACAAGCCGAACATCAAGCACGAGCTTGCCCTGACGACCGTCATCAACGGCGACCGCATCTATGCCGGTTTCTACCGGGAAAACGGAAGGCCGCATTTTTCCGACCGCTCCGCCGAACTGCTGAAATATTGCGGCCGCACCATCATGCAGGTGTTGCACAAGCATGCCGAAATCTCGCTGCTCACCGGCCCGGTGCAGGCCGAGCCGAAGCCGGTCAGCCAGAAGGCGCTGCTCGAACGGGTGCGTTCGGCAATCATGGCCGATTGCGGCCTGATCACCGCCCGCGAGGCGGAAATCTGCGCCAGCATCGTGCTCGGCTATACCGTGCTCGGCATCAGCATGAACCTCGGCATTTCGATCAACACGGTCGCGACCCACCGCAAGCGCGCCTATGCCAAGCTCCGGGTCTGCAGCCAGAACGAGCTGTTCGCCCGCTATTTCTCGGTGGTCGAAACCAATCCCGGTGCCTTGCGCTACAACTGA
PROTEIN sequence
Length: 275
MELLDAIEPVGEMVSLIGSRDFGAGFYRIANELIGIDHCTVFMCANDNPRTLVAEANCEKTAARVRSLADIYIREAYVQDPVWGTFQSAPHAGCSTFLLSPTELADEGYRREFYDKPNIKHELALTTVINGDRIYAGFYRENGRPHFSDRSAELLKYCGRTIMQVLHKHAEISLLTGPVQAEPKPVSQKALLERVRSAIMADCGLITAREAEICASIVLGYTVLGISMNLGISINTVATHRKRAYAKLRVCSQNELFARYFSVVETNPGALRYN*