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SCNpilot_cont_300_bf_scaffold_1952_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(6295..7200)

Top 3 Functional Annotations

Value Algorithm Source
Integrase n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JAU5_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 298.0
  • Bit_score: 545
  • Evalue 4.20e-152
  • rbh
integrase similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 298.0
  • Bit_score: 546
  • Evalue 5.30e-153
  • rbh
Integrase {ECO:0000313|EMBL:ACM25778.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tum similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 298.0
  • Bit_score: 546
  • Evalue 2.60e-152

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
GTGACAGTGGCCGAAGTGCTGGCCCATTACCTTAACCTGAAGCGGGAAACTGCCACACGTCCGAAGGAACTCGCCGCGAGGGCGGAGAACCTTTTGGCTTATTGGGGCGACAAGACCCTCGACGACATCACCAGCGCGACATGCGCCGAGTATGTCAAACGGCGCGGTACCAGCAACGGGTCGCGCCGGGAGCTTGAGGATCTCCGGGCCGCATGCCGCCAGGCGATCGCCGACAACGTCACGCGCCAGTCTGTGACGGTCACGCTACCACCGAAGGCTAAAGGGCGTGTGAAGCACCTTGAGCGTTCGACGCTGGCCAAGCTGATATGGGCGGCGTACCGGAAACGTGGATCGTTTCGCGGCGCGCCGAACAAGCGAAAGCCAACGGTTCACATTGCGCGCTTCACACTGGCGGCGGTCTATACCGGCAGCCGGTCGGCGCGCGTCTGGCAGGCGTCGTTCTTCAAGGAGGAGGGCAGGCCGTACATCGATCTCGATGCCGGTGTGTTTTATCGGGCCTGGGAAGGCGAGAAGGTGGCTGCTAATAAGCAAGCGCCTCCTATCAGGCTTCCGGCGCGCCTTCTCGCTCACATGCGGCGCTGGCACCGGATGGGCGCTAGGTATGTCGCCGAGTACAACGGCCAGCCGGCCGATCCGAAGCGCGCCTTCCGCAATCTCGTCGACGACGTTCTTGGAGAGGATGCCGGCGGCATCGTTCGTCATACCCTCCGGCATACGGCCGCAACATGGCTCATGCAGGCGGCGACCGATAAATGGGAGGCGTCTGGCTATCTCGGTATGACCTTGGAGACGCTGGAAAAGACCTATGGCCATCATCATCCAGATCATCAAGCAAGCGTTGGCGCTGCCTTTACGACTGGGCGAGCGGGCCGGAAAGCGAGGTAA
PROTEIN sequence
Length: 302
VTVAEVLAHYLNLKRETATRPKELAARAENLLAYWGDKTLDDITSATCAEYVKRRGTSNGSRRELEDLRAACRQAIADNVTRQSVTVTLPPKAKGRVKHLERSTLAKLIWAAYRKRGSFRGAPNKRKPTVHIARFTLAAVYTGSRSARVWQASFFKEEGRPYIDLDAGVFYRAWEGEKVAANKQAPPIRLPARLLAHMRRWHRMGARYVAEYNGQPADPKRAFRNLVDDVLGEDAGGIVRHTLRHTAATWLMQAATDKWEASGYLGMTLETLEKTYGHHHPDHQASVGAAFTTGRAGRKAR*