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SCNpilot_cont_300_bf_scaffold_1952

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1952_1
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..528
DNA (528bp) protein (176aa)
Oxygen-dependent choline dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054588}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_00750};; Short=CHD {ECO:0000256|HAMAP-Rule:MF_00750};; EC=
betA; choline dehydrogenase (EC:1.1.99.1)
choline dehydrogenase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037E37F8
SCNpilot_cont_300_bf_scaffold_1952_2
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

608..1954
DNA (1347bp) protein (449aa)
chloride channel protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036DB886
Chloride channel core {ECO:0000313|EMBL:EPE99566.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source=
Chloride channel core
SCNpilot_cont_300_bf_scaffold_1952_3
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2129..2869
DNA (741bp) protein (247aa)
Phosphoadenosine phosphosulfate reductase n=1 Tax=Rhizobium sp. Pop5 RepID=K0VP04_9RHIZ
Phosphoadenosine phosphosulfate reductase {ECO:0000313|EMBL:EJZ20576.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
phosphoadenosine phosphosulfate reductase
SCNpilot_cont_300_bf_scaffold_1952_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3070..3885
DNA (816bp) protein (272aa)
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenyla
Sulfate adenylyltransferase subunit 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1U8_9RHIZ
sulfate adenylyltransferase subunit 2
SCNpilot_cont_300_bf_scaffold_1952_5
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4173..5282
DNA (1110bp) protein (370aa)
cysN; sulfate adenylyltransferase subunit 1 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00062, ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00062, ECO:0000256|SAAS:SAAS00055979};; ATP-sulfurylase la
sulfate adenylyltransferase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000362B29A
SCNpilot_cont_300_bf_scaffold_1952_6
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5326..5757)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037FEC43
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF82848.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_1952_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6295..7200)
DNA (906bp) protein (302aa)
Integrase n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JAU5_AGRRK rbh
integrase rbh
Integrase {ECO:0000313|EMBL:ACM25778.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tum
SCNpilot_cont_300_bf_scaffold_1952_8
Rhizobium phage 16-3, Caudovirales, Viruses

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comp(7197..7601)
DNA (405bp) protein (135aa)
Excisionase n=1 Tax=Rhizobium phage 16-3 RepID=B4UTU3_BP163
Excisionase {ECO:0000313|EMBL:ABF71306.1}; TaxID=10704 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Rhizobium phage 16-3 (Bacteriophage 16-3).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1952_9
unknown

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comp(7768..8163)
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1952_10
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8291..8500
DNA (210bp) protein (70aa)
DNA-binding protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B41C61
Uncharacterized protein {ECO:0000313|EMBL:EPY00369.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirill
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1952_11
unknown

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8554..9066
DNA (513bp) protein (171aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1952_12
unknown

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9226..9390
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1952_13
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9401..9910
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti (strain SM11) RepID=F7X7S6_SINMM
Uncharacterized protein {ECO:0000313|EMBL:GAJ91061.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1952_14
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10460..10666
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037FF74B
Uncharacterized protein {ECO:0000313|EMBL:EJJ28769.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1952_15
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10736..11239
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037FCABE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC27056.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
SCNpilot_cont_300_bf_scaffold_1952_16
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11694..13322)
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MM52_PSEPS rbh
Uncharacterized protein {ECO:0000313|EMBL:ELS27864.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseu
SCNpilot_cont_300_bf_scaffold_1952_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13485..13910)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKR2_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63185.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
Displaying 17 items

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