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SCNpilot_cont_300_bf_scaffold_1644_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(7..1185)

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine-binding periplasmic protein 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWZ3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 392.0
  • Bit_score: 773
  • Evalue 9.40e-221
  • rbh
Spermidine/putrescine-binding periplasmic protein 1 {ECO:0000313|EMBL:EYR79412.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 392.0
  • Bit_score: 773
  • Evalue 1.30e-220
putative spermidine/putrescine ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 379.0
  • Bit_score: 233
  • Evalue 1.30e-58

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGACTGATAATCACAATCATATCCGCGTGCTTGCCTCCGCAGACTGGACCCGGCGCAATTTCTTGCGCCTAGCGGCCTTTGCGGGAGGTGTGGCCGCCCTGTCCGTCAACGGCGTTGCCATCGCCGCGGATAAGGGCGATCTCGCCGAAAAAGCGCGCAACCTGAAGGGTGATGCCGCACTGGGCGACACGCTATTCATCTATTCCTGGGCGGACTACGCCAACCCGGACGTGCTCGACGCCTTTTCGAAGGGCGCCGGTCCGCGCATTGAAATCGCCACCTTCGATTCCGTCGAAGCGGCCATCGCCAAGCTGGAAATCTCAGGCGGCTCCGCCGGCTACGACATCGTCGTCGTGGGCGATGCCTATGTGGAACAGATGATCAATCGCAAGCTGATCCAGAAGCTGGACCATTCGAAGATTCCGAATCTTGGAAACTTGCGCGACGAATTCCACAAGCTGCCATTCGATCCGGGCAATCAGTACACGGTTATGAAGAATTTCGGCACCATCGGCATTCTCTACAACAACACCGTGATCAAGGAGCCGATCAAGTCCTGGGACGATTTCTTCCGGGTGGGCGCCTCCGAGGTTGCAAGCCACCGTCTCTCCGTCCTCAACGACCAGCCGAGCGTCTTCGGTCTCGTCTTCTGGCGCGAAGGCAAGGACTACAATACGGGTGACGAGAAGCGCCTGAACGAAGCCAAGGATGTGCTGATTAAGGACCTCATCCCGCACCTCAAGGCCTTCGACGCCAACCCTGTGCAGGGACTGCTGAACGGCGACTACGTGCTTAGCCAAGGCTATCTCGGCAGCTCGCGCCATATTTTCGAGCAGGATCCCGACAGCTACACCTGGGTCTATCCGGAGCCGCAATGCGTGCTGTGGAGCGATCATTACGCGGTGCCGTCCGGGTCCAGGCACACAGACGCCGCCCATGCCTTCATCAACTATATGCTGGATCCAGATGTAGCCGCAGCCGAAGTGGCCCATATCGGATATGACACCGGCGTAAAGGGTGTCATCGAGAAGCTGCCTGATGACCTCGTCCGCAAGGACATGATCGTGTTTCCCGAGGGGGTCACCGACCGCCTTATCTACCAGAAGGTGGAAGGCTCCAATCCCACGCTGCGCATCCAGATCTTTAACGAATTGAAGGCGGCGGCGGCACGCAATTAA
PROTEIN sequence
Length: 393
MTDNHNHIRVLASADWTRRNFLRLAAFAGGVAALSVNGVAIAADKGDLAEKARNLKGDAALGDTLFIYSWADYANPDVLDAFSKGAGPRIEIATFDSVEAAIAKLEISGGSAGYDIVVVGDAYVEQMINRKLIQKLDHSKIPNLGNLRDEFHKLPFDPGNQYTVMKNFGTIGILYNNTVIKEPIKSWDDFFRVGASEVASHRLSVLNDQPSVFGLVFWREGKDYNTGDEKRLNEAKDVLIKDLIPHLKAFDANPVQGLLNGDYVLSQGYLGSSRHIFEQDPDSYTWVYPEPQCVLWSDHYAVPSGSRHTDAAHAFINYMLDPDVAAAEVAHIGYDTGVKGVIEKLPDDLVRKDMIVFPEGVTDRLIYQKVEGSNPTLRIQIFNELKAAAARN*