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SCNpilot_cont_300_bf_scaffold_1644

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1644_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7..1185)
DNA (1179bp) protein (393aa)
Spermidine/putrescine-binding periplasmic protein 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWZ3_9RHIZ rbh
Spermidine/putrescine-binding periplasmic protein 1 {ECO:0000313|EMBL:EYR79412.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="
putative spermidine/putrescine ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_1644_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1334..2470)
DNA (1137bp) protein (379aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobia
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGY4_9RHIZ rbh
spermidine/putrescine ABC transporter ATPase
SCNpilot_cont_300_bf_scaffold_1644_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2473..3222)
DNA (750bp) protein (250aa)
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:EYR79414.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EYR79414.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizob
3-oxoacyl-[acyl-carrier-protein] reductase FabG n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXW5_9RHIZ rbh
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_300_bf_scaffold_1644_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3318..4838)
DNA (1521bp) protein (507aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000313|EMBL:EYR79415.1}; EC=3.5.4.28 {ECO:0000313|EMBL:EYR79415.1};; EC=3.5.4.31 {ECO:0000313|EMBL:EYR79415.1};; TaxID=1410620 species="Bac
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1C5_9RHIZ rbh
amidohydrolase rbh
SCNpilot_cont_300_bf_scaffold_1644_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4945..6396
DNA (1452bp) protein (484aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000313|EMBL:EYR79416.1}; EC=3.5.4.28 {ECO:0000313|EMBL:EYR79416.1};; EC=3.5.4.31 {ECO:0000313|EMBL:EYR79416.1};; TaxID=1410620 species="Bac
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D5V9_9RHIZ rbh
amidohydrolase
SCNpilot_cont_300_bf_scaffold_1644_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6433..6792
DNA (360bp) protein (120aa)
Endoribonuclease, L-PSP family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWZ8_9RHIZ
Endoribonuclease, L-PSP family protein {ECO:0000313|EMBL:EYR79417.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1644_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6918..8162
DNA (1245bp) protein (415aa)
Allantoate amidohydrolase AllC {ECO:0000313|EMBL:EYR79418.1}; EC=3.5.3.- {ECO:0000313|EMBL:EYR79418.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae
Allantoate amidohydrolase AllC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGY9_9RHIZ rbh
allantoate amidohydrolase rbh
SCNpilot_cont_300_bf_scaffold_1644_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8173..9099
DNA (927bp) protein (309aa)
Urate catabolism protein {ECO:0000313|EMBL:EYR79419.1}; EC=3.5.1.41 {ECO:0000313|EMBL:EYR79419.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shi
Urate catabolism protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXW8_9RHIZ rbh
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1644_9
Mycobacterium setense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9157..10266)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036AA32B
ABC transporter {ECO:0000313|EMBL:KHO27142.1}; TaxID=431269 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium setense.;"
ABC transporter
SCNpilot_cont_300_bf_scaffold_1644_10
Mycobacterium setense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10350..11447)
DNA (1098bp) protein (366aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=431269 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycoba
ABC transporter n=1 Tax=Patulibacter americanus RepID=UPI0003B760D0
ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_1644_11
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11744..12742)
DNA (999bp) protein (333aa)
transcriptional regulator n=1 Tax=Streptomyces RepID=UPI0003731DB8
Transcriptional regulator {ECO:0000313|EMBL:AKH83453.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
putative LacI-family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1644_12
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12974..15253
DNA (2280bp) protein (760aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B8M6_STRRD rbh
L-carnitine dehydratase/bile acid-inducible protein F
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ACZ87836.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" sou
SCNpilot_cont_300_bf_scaffold_1644_13
Mesorhizobium sp. LNJC372A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15281..16165
DNA (885bp) protein (295aa)
NADPH dependend quinone reductase n=1 Tax=Rhizobium mongolense RepID=UPI0003B72344 rbh
NADPH dependend quinone reductase {ECO:0000313|EMBL:ESY50735.1}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhi
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1644_14
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16231..17034
DNA (804bp) protein (268aa)
3-hydroxybutyrate dehydrogenase n=1 Tax=Rhizobium mongolense RepID=UPI0003B45FFF rbh
3-hydroxybutyrate dehydrogenase
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:AIB15730.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirill
SCNpilot_cont_300_bf_scaffold_1644_15
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17085..17534
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B77C5B
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:AGS26555.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobiu
SCNpilot_cont_300_bf_scaffold_1644_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17692..17829)
DNA (138bp) protein (46aa)
Alcohol dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LS66_RHITR
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:AGB74062.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source=
Displaying 16 items

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