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SCNpilot_cont_300_bf_scaffold_5535_10

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 9571..10425

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, RpiR family n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X2Q6_OCHA4 similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 284.0
  • Bit_score: 502
  • Evalue 3.80e-139
  • rbh
helix-turn-helix domain, rpiR family protein similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 284.0
  • Bit_score: 500
  • Evalue 3.10e-139
  • rbh
RpiR family transcriptional regulator {ECO:0000313|EMBL:EXL03106.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum a similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 284.0
  • Bit_score: 500
  • Evalue 1.60e-138

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Taxonomy

Ochrobactrum anthropi → Ochrobactrum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
GTGGCGAAAGATATTGTCACGCGCCTGCAAAGCGCAGACCTGCGCAAATCGAAGACCGACAAGCTGATCGCCCAGTATATCGAGCGCAATCTGGCCGAACTGCCGTTCGAGACGGCGAAATCCATCGCCACGCGGCTGGGCATTTCGCAGATGACGGTCGGGCGCTACCTGCGCCGCCTTGGCTTCGACGGCCTCGACGAGATGAAGACGGCGCTCAGGCGCGGCCGCTCCAATCCCGCCTGGCAGGTGAAAGGCCCGGTCGCCCGGCTGCAGCAGGATATCCGCGAGGGCAAGCTGCTCGCCGGCCTCGTGCAGCAGCAGATCGACAATCTCGGGGTCGTTTACGAGCTGATGACCCAACCCGAATGGCAGCAGACCATCGATGCGCTGATTTCGGCCAGCGAAGTCTATGTCGCCGCCTACCAGAATGTGCGCGGCATCGCGCAATATTTCGCCTCGCAGCTTTCCTATTCGCGCCCGCGCGTCTCCTTCATGGACGGGCTGAACGGCACCTATGCCGAAGCGCTCGACGGTTCGGTCGAGGGCCGCGTGCTCTTCCTGCACGACGTGCGCCGCTTCGCCTCCAAGGCCCGGCCGCTGGCGGCCGAAGCCCGCCGCGCCGGCGTCAAGGTCATCCTGCTCACCGACGAATTCTGCCCTTGGGCCAGCGAGGTCGCCGATATCGCCCTGATCGTGCCCGGCTCGCATGGCCCCCTCTGGGACGGCGCCGCCACCATGACGGCAGTCATGGACCTGATGCTCTCCAACATCATCGTCCTCATCGGCAACCAGGTGGACGAGCGCGTCCAAACGCTCACGCGCCTGCAGGACATTTTTGGCGATTTCGAGAGCTGA
PROTEIN sequence
Length: 285
VAKDIVTRLQSADLRKSKTDKLIAQYIERNLAELPFETAKSIATRLGISQMTVGRYLRRLGFDGLDEMKTALRRGRSNPAWQVKGPVARLQQDIREGKLLAGLVQQQIDNLGVVYELMTQPEWQQTIDALISASEVYVAAYQNVRGIAQYFASQLSYSRPRVSFMDGLNGTYAEALDGSVEGRVLFLHDVRRFASKARPLAAEARRAGVKVILLTDEFCPWASEVADIALIVPGSHGPLWDGAATMTAVMDLMLSNIIVLIGNQVDERVQTLTRLQDIFGDFES*