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SCNpilot_cont_300_bf_scaffold_5535

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5535_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..448
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYD1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83477.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5535_2
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(491..1330)
DNA (840bp) protein (280aa)
DNA polymerase III subunit beta n=1 Tax=Oceanicola sp. S124 RepID=UPI000255811E
Uncharacterized protein {ECO:0000313|EMBL:KFC66371.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
DNA polymerase III subunit beta
SCNpilot_cont_300_bf_scaffold_5535_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1433..1669)
DNA (237bp) protein (79aa)
Flavin reductase domain protein FMN-binding n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B6A2L3_RHILW
flavin reductase domain-containing protein
Flavin reductase domain protein FMN-binding {ECO:0000313|EMBL:ACI57686.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group
SCNpilot_cont_300_bf_scaffold_5535_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1927..3492)
DNA (1566bp) protein (522aa)
4-hydroxyphenylacetate 3-hydroxylase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V4F2_9RHIZ
4-hydroxyphenylacetate 3-hydroxylase {ECO:0000313|EMBL:ENN88765.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
SCNpilot_cont_300_bf_scaffold_5535_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3590..4465
DNA (876bp) protein (292aa)
AraC family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00036D83EA rbh
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJC64024.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
putative AraC family transcriptional regulator rbh
SCNpilot_cont_300_bf_scaffold_5535_6
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4444..5583)
DNA (1140bp) protein (380aa)
D-aminopeptidase {ECO:0000313|EMBL:CAA66259.1}; EC=3.4.11.19 {ECO:0000313|EMBL:CAA66259.1};; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;
D-aminopeptidase n=1 Tax=Ochrobactrum anthropi RepID=Q59632_OCHAN
peptidase S58 DmpA
SCNpilot_cont_300_bf_scaffold_5535_7
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5585..6415)
DNA (831bp) protein (277aa)
Ornithine carbamoyltransferase {ECO:0000313|EMBL:ABS15514.1}; EC=2.1.3.3 {ECO:0000313|EMBL:ABS15514.1};; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae;
Ornithine carbamoyltransferase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X2R0_OCHA4 rbh
ornithine carbamoyltransferase rbh
SCNpilot_cont_300_bf_scaffold_5535_8
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6498..7256)
DNA (759bp) protein (253aa)
Binding protein-protein-dependent transport system inner membrane component protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UTC0_9RHIZ
Binding protein-protein-dependent transport system inner membrane component protein {ECO:0000313|EMBL:ENN84960.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhi
binding-protein-dependent transport system inner membrane protein
SCNpilot_cont_300_bf_scaffold_5535_9
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7253..8344)
DNA (1092bp) protein (364aa)
spermidine/putrescine ABC transporter ATPase n=1 Tax=Ochrobactrum anthropi RepID=UPI000287E8F4 rbh
ABC transporter family protein rbh
Spermidine/putrescine ABC transporter ATPase subunit {ECO:0000313|EMBL:ABS15512.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" sour
SCNpilot_cont_300_bf_scaffold_5535_10
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9571..10425
DNA (855bp) protein (285aa)
Transcriptional regulator, RpiR family n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X2Q6_OCHA4 rbh
helix-turn-helix domain, rpiR family protein rbh
RpiR family transcriptional regulator {ECO:0000313|EMBL:EXL03106.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum a
SCNpilot_cont_300_bf_scaffold_5535_11
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11018..11143
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UN35_SINMW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR65065.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" sou
SCNpilot_cont_300_bf_scaffold_5535_12
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11203..11790
DNA (588bp) protein (196aa)
Integrase catalytic region n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q7V7_9RHIZ rbh
Integrase catalytic region {ECO:0000313|EMBL:EKF59789.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.
insD; IS2 insertion element transposase InsAB'; CP4-44 prophage
Displaying 12 items

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