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SCNpilot_cont_300_bf_scaffold_236

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Displaying items 1-30 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_236_1
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1353)
DNA (1353bp) protein (451aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Sphingomonas melonis RepID=UPI00035D238D
DNA-directed RNA polymerase subunit beta
SCNpilot_cont_300_bf_scaffold_236_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1323..2864)
DNA (1542bp) protein (514aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:AJP72130.1}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:
DNA-directed RNA polymerase subunit beta n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4C6E1
DNA-directed RNA polymerase subunit beta
SCNpilot_cont_300_bf_scaffold_236_3
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3142..5070
DNA (1929bp) protein (643aa)
glutaryl-7-ACA acylase n=1 Tax=Sphingomonas melonis RepID=UPI00036A7B48 rbh
Hydrolase CocE/NonD family protein {ECO:0000313|EMBL:EZP55005.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sph
glutaryl-7-ACA acylase
SCNpilot_cont_300_bf_scaffold_236_4
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5128..6321
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD619
Uncharacterized protein {ECO:0000313|EMBL:EZP57295.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_236_5
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6571..6951)
DNA (381bp) protein (127aa)
50S ribosomal protein L7/L12 n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0H191_9SPHN
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphing
50S ribosomal protein L7/L12
SCNpilot_cont_300_bf_scaffold_236_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7019..7534)
DNA (516bp) protein (172aa)
50S ribosomal protein L10 n=1 Tax=Sphingomonas melonis RepID=UPI00036DD128
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S
50S ribosomal protein L10
SCNpilot_cont_300_bf_scaffold_236_7
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7829..8998)
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000378E16D
Putative lactate 2-monooxygenase {ECO:0000313|EMBL:GAO38892.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphin
lactate 2-monooxygenase
SCNpilot_cont_300_bf_scaffold_236_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9062..11131)
DNA (2070bp) protein (690aa)
TonB-dependent Receptor Plug domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WYF0_9SPHN rbh
TonB-dependent receptor rbh
TonB-dependent receptor {ECO:0000313|EMBL:AIT06707.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas t
SCNpilot_cont_300_bf_scaffold_236_9
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11296..11988)
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4A755 rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo
50S ribosomal protein L1
SCNpilot_cont_300_bf_scaffold_236_10
Sphingobium lucknowense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11991..12422)
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5ABD8
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
rplK; 50S ribosomal protein L11
SCNpilot_cont_300_bf_scaffold_236_11
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12573..13556)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4FDEA rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP52986.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_236_12
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13630..14943)
DNA (1314bp) protein (438aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadacea
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036508E5
signal protein
SCNpilot_cont_300_bf_scaffold_236_13
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14994..15731)
DNA (738bp) protein (246aa)
chemotaxis protein CheY n=2 Tax=Sphingomonas RepID=UPI000287B5AA
Putative two-component response regulator {ECO:0000313|EMBL:GAL99664.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sour
chemotaxis protein CheY
SCNpilot_cont_300_bf_scaffold_236_14
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15800..16414)
DNA (615bp) protein (205aa)
UPI0003CFB178 related cluster n=1 Tax=unknown RepID=UPI0003CFB178
Uncharacterized protein {ECO:0000313|EMBL:ESZ86076.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_236_15
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16533..17318)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000367DF1E rbh
Uncharacterized protein {ECO:0000313|EMBL:KHA65651.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
SCNpilot_cont_300_bf_scaffold_236_16
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17315..18847)
DNA (1533bp) protein (511aa)
lcfB2; long-chain-fatty-acid--CoA ligase LcfB (EC:6.2.1.3)
4-coumarate--CoA ligase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD1CB rbh
4-coumarate--CoA ligase {ECO:0000313|EMBL:KHA65650.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
SCNpilot_cont_300_bf_scaffold_236_17
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18919..19710
DNA (792bp) protein (264aa)
3-oxoacyl-acyl-carrier protein reductase {ECO:0000313|EMBL:ERJ20081.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ERJ20081.1};; TaxID=1033802 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaera
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003790142
SDR-family protein
SCNpilot_cont_300_bf_scaffold_236_18
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20014..20706)
DNA (693bp) protein (231aa)
LrgB family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2III2_9SPHN rbh
LrgB family protein
LrgB family protein {ECO:0000313|EMBL:BAK67105.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-
SCNpilot_cont_300_bf_scaffold_236_19
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20703..21065)
DNA (363bp) protein (121aa)
LrgA family protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VQ14_9SPHN
LrgA family protein {ECO:0000313|EMBL:EZP82183.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
LrgA family protein
SCNpilot_cont_300_bf_scaffold_236_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21145..21843)
DNA (699bp) protein (233aa)
glutathione S-transferase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002893B6A rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36852.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
putative glutathione transferase
SCNpilot_cont_300_bf_scaffold_236_21
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21892..23127)
DNA (1236bp) protein (412aa)
MFS transporter n=1 Tax=Sphingomonas elodea RepID=UPI0002630ACA rbh
Sphingomonas taxi strain 30a NODE_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29167.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
major facilitator transporter
SCNpilot_cont_300_bf_scaffold_236_22
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23257..24477
DNA (1221bp) protein (407aa)
acyl-CoA dehydrogenase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000376FCDB rbh
Sphingomonas taxi strain 30a NODE_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29166.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
acyl-CoA dehydrogenase
SCNpilot_cont_300_bf_scaffold_236_23
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24574..25638
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000375994D
Sphingomonas taxi strain 30a NODE_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29144.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
acyl-CoA dehydrogenase
SCNpilot_cont_300_bf_scaffold_236_24
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25684..26928)
DNA (1245bp) protein (415aa)
TetR family transcriptional regulator n=1 Tax=Sphingomonas melonis RepID=UPI00036684C3
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AIT05906.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
SCNpilot_cont_300_bf_scaffold_236_25
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27083..28390
DNA (1308bp) protein (436aa)
acyl-CoA dehydrogenase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036B43C9
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KHA65648.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
acyl-CoA dehydrogenase
SCNpilot_cont_300_bf_scaffold_236_26
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28460..29548
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036118E0
Sphingomonas taxi strain 30a NODE_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29142.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
alcohol dehydrogenase rbh
SCNpilot_cont_300_bf_scaffold_236_27
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29545..30603
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000365B67E
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:KHA65653.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphin
aminoglycoside phosphotransferase
SCNpilot_cont_300_bf_scaffold_236_28
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30620..31384
DNA (765bp) protein (255aa)
short-chain dehydrogenase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000381E72D
Short-chain dehydrogenase {ECO:0000313|EMBL:KHA65652.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_300_bf_scaffold_236_29
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31399..32199
DNA (801bp) protein (267aa)
oxidoreductase n=1 Tax=Sphingomonas melonis RepID=UPI000381460B
Sphingomonas taxi strain 30a NODE_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29139.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
oxidoreductase
SCNpilot_cont_300_bf_scaffold_236_30
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32242..32475)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WGD2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EIZ79268.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
Displaying items 1-30 of 138 in total

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