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SCNpilot_cont_300_bf_scaffold_487

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_487_1
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..78
DNA (78bp) protein (26aa)
Transposase {ECO:0000313|EMBL:KEZ18025.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphin
SCNpilot_cont_300_bf_scaffold_487_2
unknown

Not on your lists

493..828
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_487_3
unknown

Not on your lists

1560..2048
DNA (489bp) protein (163aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_487_4
unknown

Not on your lists

2048..2335
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_487_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2381..2974
DNA (594bp) protein (198aa)
Putative chitinase n=1 Tax=Sphingomonas sp. S17 RepID=F3WY72_9SPHN
Chitinase class I {ECO:0000313|EMBL:EKY30618.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminut
glycoside hydrolase
SCNpilot_cont_300_bf_scaffold_487_6
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3191..3460
DNA (270bp) protein (90aa)
Uncharacterized protein {ECO:0000313|EMBL:KHA63448.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
SCNpilot_cont_300_bf_scaffold_487_7
unknown

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3467..3733
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_487_8
unknown

Not on your lists

comp(3759..3947)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_487_9
unknown

Not on your lists

4529..4648
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_487_10

Not on your lists

comp(5217..5594)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI00026321FE
Uncharacterized protein family {ECO:0000313|EMBL:AGU09920.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_487_11
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5630..5818)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI00026321FF
Uncharacterized protein {ECO:0000313|EMBL:AHE51748.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
putative periplasmic or secreted lipoprotein
SCNpilot_cont_300_bf_scaffold_487_12
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6514..7422)
DNA (909bp) protein (303aa)
metal-dependent hydrolase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000288D97E rbh
Metal-dependent hydrolase {ECO:0000313|EMBL:EJU13454.1}; Flags: Fragment;; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sou
amidohydrolase 2
SCNpilot_cont_300_bf_scaffold_487_13
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7598..8008)
DNA (411bp) protein (137aa)
blue-light sensor BLUF n=1 Tax=Sphingomonas RepID=UPI0002894F4B
DNA, contig: SP644 {ECO:0000313|EMBL:GAN14786.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
BLUF domain-containing protein
SCNpilot_cont_300_bf_scaffold_487_14
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8293..8877)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B480E4
Putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:AJA09232.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
SCNpilot_cont_300_bf_scaffold_487_15
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9008..9376)
DNA (369bp) protein (123aa)
DNA repair protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R7U6_PHEZH
DNA repair protein RadC {ECO:0000313|EMBL:KJV40914.1}; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas s
DNA repair protein
SCNpilot_cont_300_bf_scaffold_487_16
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9867..14099)
DNA (4233bp) protein (1411aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6DE85 rbh
Uncharacterized protein {ECO:0000313|EMBL:EGL63579.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" so
hypothetical protein
SCNpilot_cont_300_bf_scaffold_487_17
unknown

Not on your lists

14758..15009
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_487_18
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15285..16250
DNA (966bp) protein (322aa)
Putative secreted peptidyl prolyl cis-trans isomerase, cyclophilin type n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSQ0_SPHAL rbh
putative secreted peptidyl prolyl cis-trans isomerase, cyclophilin type
Putative secreted peptidyl prolyl cis-trans isomerase, cyclophilin type {ECO:0000313|EMBL:ABF53322.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomo
SCNpilot_cont_300_bf_scaffold_487_19
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16255..16836)
DNA (582bp) protein (194aa)
ABC transporter n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA748
ABC transporter {ECO:0000313|EMBL:KHA64906.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.
ABC transporter
SCNpilot_cont_300_bf_scaffold_487_20
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16845..17810)
DNA (966bp) protein (322aa)
Mce related family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZE1_9SPHN rbh
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11951.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
mammalian cell entry protein rbh
SCNpilot_cont_300_bf_scaffold_487_21
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17810..18628)
DNA (819bp) protein (273aa)
iron ABC transporter ATP-binding protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000360BD6C rbh
iron ABC transporter ATP-binding protein
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26246.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
SCNpilot_cont_300_bf_scaffold_487_22
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18628..19725)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000378B866 rbh
ABC transporter permease {ECO:0000313|EMBL:KHA64898.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
ABC transporter permease
SCNpilot_cont_300_bf_scaffold_487_23
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19781..21046)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036A31B2
Uncharacterized protein {ECO:0000313|EMBL:AHE56845.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
membrane protein
SCNpilot_cont_300_bf_scaffold_487_24
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21126..24341)
DNA (3216bp) protein (1072aa)
acriflavin resistance protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4F5AE rbh
AcrB/AcrD/AcrF family protein {ECO:0000313|EMBL:EZP55840.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
ABC transporter permease
SCNpilot_cont_300_bf_scaffold_487_25
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24350..25522)
DNA (1173bp) protein (391aa)
secretion protein HylD n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5F0BB
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11946.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
secretion protein HylD
SCNpilot_cont_300_bf_scaffold_487_26
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25722..26435
DNA (714bp) protein (238aa)
membrane protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5C4F6
hypothetical protein
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11945.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
SCNpilot_cont_300_bf_scaffold_487_27
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26492..26749)
DNA (258bp) protein (86aa)
Transglycosylase associated family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZE8_9SPHN
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11944.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
SCNpilot_cont_300_bf_scaffold_487_28
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26976..27275)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA753
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP73325.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_cont_300_bf_scaffold_487_29
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27384..27614)
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZF0_9SPHN
hypothetical protein
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11942.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
SCNpilot_cont_300_bf_scaffold_487_30
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27763..28866
DNA (1104bp) protein (368aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonada
thiouridylase n=1 Tax=Sphingomonas melonis RepID=UPI00035C2426 rbh
thiouridylase rbh
Displaying items 1-30 of 65 in total

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