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SCNpilot_cont_300_bf_scaffold_3116

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3116_1
Hyphomonas jannaschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..300)
DNA (300bp) protein (100aa)
hemL; glutamate-1-semialdehyde-2,1-aminomutase (EC:5.4.3.8)
glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Caulobacter RepID=UPI000371A65D
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000313|EMBL:KCZ89815.1}; TaxID=1280952 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hy
SCNpilot_cont_300_bf_scaffold_3116_2
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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390..1343
DNA (954bp) protein (318aa)
hypothetical protein n=2 Tax=Caulobacter RepID=UPI00035E21ED rbh
sugar kinase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
sugar kinase
SCNpilot_cont_300_bf_scaffold_3116_3
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1330..1983
DNA (654bp) protein (218aa)
class II aldolase/adducin, N-terminal; K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Class II aldolase/adducin, N-terminal n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RE85_PHEZH
class II aldolase/adducin, N-terminal
SCNpilot_cont_300_bf_scaffold_3116_4
Sphingopyxis macrogoltabida, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2016..3257
DNA (1242bp) protein (414aa)
FumA n=1 Tax=Sphingopyxis macrogoltabida RepID=D2D3B3_SPHMC
FumA {ECO:0000313|EMBL:ACS27053.1}; TaxID=33050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis macrogoltabida (Sphing
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3116_5
Mesorhizobium sp. L103C105A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4495..4830)
DNA (336bp) protein (112aa)
UPI0003CFA557 related cluster n=1 Tax=unknown RepID=UPI0003CFA557
Uncharacterized protein {ECO:0000313|EMBL:ESZ77685.1}; TaxID=1287074 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
SCNpilot_cont_300_bf_scaffold_3116_6
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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5025..5966
DNA (942bp) protein (314aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
Histidine--tRNA ligase n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TGP0_PARBH
Suspect SCG annotation. See neighboring gene [SCNpilot_cont_300_bf_scaffold_3116_7].
histidyl-tRNA synthetase
SCNpilot_cont_300_bf_scaffold_3116_7
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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5974..7143
DNA (1170bp) protein (390aa)
ATP phosphoribosyltransferase regulatory subunit {ECO:0000313|EMBL:CDO60348.1}; EC=2.4.2.17 {ECO:0000313|EMBL:CDO60348.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candid
Histidine--tRNA ligase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQN9_PARL1 rbh
hisZ; ATP phosphoribosyltransferase regulatory subunit
SCNpilot_cont_300_bf_scaffold_3116_8
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7146..8123
DNA (978bp) protein (326aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E6E66A
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; E
SCNpilot_cont_300_bf_scaffold_3116_9
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8129..9217)
DNA (1089bp) protein (363aa)
Selenocysteine lyase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV47_9RHIZ
Selenocysteine lyase {ECO:0000313|EMBL:EIM27839.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3116_10
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9262..10629)
DNA (1368bp) protein (456aa)
Ste24 endopeptidase (EC:3.4.24.84)
Ste24 endopeptidase {ECO:0000313|EMBL:ACY18025.1}; EC=3.4.24.84 {ECO:0000313|EMBL:ACY18025.1};; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Na
Ste24 endopeptidase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LZP6_HALO1 rbh
SCNpilot_cont_300_bf_scaffold_3116_11
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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10736..11518
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0FXW9_9BRAD
2-hydroxymuconic semialdehyde hydrolase (EC 3.1.1.-) {ECO:0000313|EMBL:CDO59936.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candid
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3116_12
unknown

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11575..11688
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying 12 items

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