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SCNpilot_cont_300_bf_scaffold_7865

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_7865_1
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(375..800)
DNA (426bp) protein (142aa)
Glucose-binding protein n=1 Tax=Pseudomonas putida RepID=Q9Z422_PSEPU
Glucose-binding protein {ECO:0000313|EMBL:AAD00241.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (A
SCNpilot_cont_300_bf_scaffold_7865_2
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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971..1765
DNA (795bp) protein (265aa)
ABC-3 protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LSG2_9PROT
ABC-3 protein {ECO:0000313|EMBL:EKF07842.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundim
ABC-3 protein
SCNpilot_cont_300_bf_scaffold_7865_3
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1762..2259
DNA (498bp) protein (166aa)
Zinc uptake transcriptional regulator, Fur family protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J442_9PROT
Fur family transcriptional regulator {ECO:0000313|EMBL:EZQ18045.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud
transcriptional regulator np20
SCNpilot_cont_300_bf_scaffold_7865_4
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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2270..3175
DNA (906bp) protein (302aa)
Adenylate cyclase {ECO:0000313|EMBL:CDO58582.1}; EC=4.6.1.1 {ECO:0000313|EMBL:CDO58582.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source
Putative Chase2 sensor protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HW36_PARL1
putative Chase2 sensor protein
SCNpilot_cont_300_bf_scaffold_7865_5
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3186..3959)
DNA (774bp) protein (258aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; EC=3.4
ddpX; putative D-alanyl-d-alanine dipeptidase (EC:3.4.13.22)
Putative D-alanyl-d-alanine dipeptidase n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LLX3_DINSH
SCNpilot_cont_300_bf_scaffold_7865_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4037..4330
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTE6_PARL1
Deacylase {ECO:0000313|EMBL:KIZ37049.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
deacylase
SCNpilot_cont_300_bf_scaffold_7865_7
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4327..5067
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTE6_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS63179.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivor
SCNpilot_cont_300_bf_scaffold_7865_8
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5892..7154)
DNA (1263bp) protein (421aa)
Permease of the major facilitator superfamily n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W817_MAGSA
MFS-type transporter Tax=GWC2_Geobacteraceae_53_11_curated
MFS transporter
SCNpilot_cont_300_bf_scaffold_7865_9
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7208..7942)
DNA (735bp) protein (245aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiac
Isoprenyl transferase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BHV6_9RHIZ
undecaprenyl diphosphate synthase
Displaying 9 items

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