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SCNpilot_cont_300_bf_scaffold_6243

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_6243_1
unknown

Not on your lists

135..509
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_6243_2
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

571..942
DNA (372bp) protein (124aa)
arsenate reductase (EC:1.20.4.1) Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI000300C088
arsC; arsenate reductase
SCNpilot_cont_300_bf_scaffold_6243_3
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(952..1353)
DNA (402bp) protein (134aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YD59_9BRAD
response regulator receiver protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
response regulator
SCNpilot_cont_300_bf_scaffold_6243_4
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1489..2232)
DNA (744bp) protein (248aa)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701};; Sulfate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01701}; Ta
Sulfate/molybdate ABC transporter ATPase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VV87_9GAMM
sulfate ABC transporter
SCNpilot_cont_300_bf_scaffold_6243_5
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2243..3082)
DNA (840bp) protein (280aa)
Sulfate ABC transporter, inner membrane subunit CysW n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S104_9SPHN
sulfate ABC transporter, inner membrane subunit CysW
Sulfate ABC transporter, inner membrane subunit CysW {ECO:0000313|EMBL:AGH48603.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomon
SCNpilot_cont_300_bf_scaffold_6243_6
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3093..3938)
DNA (846bp) protein (282aa)
Sulfate transport system permease protein n=2 Tax=Bordetella bronchiseptica RepID=K0MUR8_BORBM
Sulfate ABC transporter, permease protein CysT {ECO:0000313|EMBL:KCB36568.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source
cysU; sulfate transport system permease
SCNpilot_cont_300_bf_scaffold_6243_7
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4026..4934)
DNA (909bp) protein (303aa)
ABC transporter permease n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI000377EAB1
sulfate ABC transporter substrate-binding protein
Sulfate ABC transporter, periplasmic sulfate-binding protein {ECO:0000313|EMBL:ABZ73674.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Cau
SCNpilot_cont_300_bf_scaffold_6243_8
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4976..5407)
DNA (432bp) protein (144aa)
Polyphosphate-selective porin O n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R7Y1_PHEZH
oprO; polyphosphate-selective porin O; K07221 phosphate-selective porin OprO and OprP Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
oprO; polyphosphate-selective porin O
SCNpilot_cont_300_bf_scaffold_6243_9
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5358..6371)
DNA (1014bp) protein (338aa)
PREDICTED: uncharacterized protein LOC102338577 n=1 Tax=Pantholops hodgsonii RepID=UPI0003C196B9
oprO; polyphosphate-selective porin O
Polyphosphate-selective porin O {ECO:0000313|EMBL:ACG77514.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Pheny
SCNpilot_cont_300_bf_scaffold_6243_10
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6570..7022)
DNA (453bp) protein (151aa)
Rrf2 family transcriptional regulator n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI000371E3BB
BadM/Rrf2 family transcriptional regulator
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:ADG09575.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source
SCNpilot_cont_300_bf_scaffold_6243_11
R_WWE3_53_14, WWE3, Bacteria

Not on your lists

7232..7960
DNA (729bp) protein (243aa)
spnH; o-methyltransferase Tax=RIFCSPLOWO2_01_FULL_WWE3_53_14_curated
spnH; o-methyltransferase id=14424051 bin=bin11_novelCP species=Photorhabdus asymbiotica genus=Photorhabdus taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin11_novelCP organism_group=Unknown_CP
spnH; probable o-methyltransferase
SCNpilot_cont_300_bf_scaffold_6243_12
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7982..11050)
DNA (3069bp) protein (1023aa)
Acriflavin resistance protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y1Y4_9PROT
Acriflavin resistance protein {ECO:0000313|EMBL:EGY00472.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitros
multidrug efflux protein
SCNpilot_cont_300_bf_scaffold_6243_13
Vibrio ponticus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11059..11289)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036DC1A0
RND efflux system membrane fusion protein CmeA {ECO:0000313|EMBL:GAK85956.1}; TaxID=265668 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio p
RND family efflux transporter MFP subunit
SCNpilot_cont_300_bf_scaffold_6243_14
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11303..12190)
DNA (888bp) protein (296aa)
Multidrug resistance protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IA28_BORPD
multidrug resistance protein
Multidrug resistance protein {ECO:0000313|EMBL:CAP44537.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii
SCNpilot_cont_300_bf_scaffold_6243_15
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12321..13202)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002FAF518 rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJC43645.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LT
enoyl-CoA hydratase/isomerase
SCNpilot_cont_300_bf_scaffold_6243_16
unknown

Not on your lists

13343..13693
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_6243_17
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13735..14727)
DNA (993bp) protein (331aa)
acyl-CoA dehydrogenase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034AFCE2
acyl-CoA dehydrogenase domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Acyl-CoA dehydrogenase-like
SCNpilot_cont_300_bf_scaffold_6243_18
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14958..16079)
DNA (1122bp) protein (374aa)
Acyl-CoA dehydrogenase family protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BZF6_HYPNA
Acyl-CoA dehydrogenase family protein {ECO:0000313|EMBL:KDA00016.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hypho
acyl-CoA dehydrogenase family protein
SCNpilot_cont_300_bf_scaffold_6243_19
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16185..17432)
DNA (1248bp) protein (416aa)
PREDICTED: cytochrome P450 55A3-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C14A15 rbh
p450; cytochrome P450 Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
p450; cytochrome P450
SCNpilot_cont_300_bf_scaffold_6243_20
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(17584..17793)
DNA (210bp) protein (70aa)
Export ABC transporter permease protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWC2_SYNAS
antimicrobial peptide ABC transporter permease Tax=RBG_16_Acidobacteria_68_9_curated
export ABC transporter permease
SCNpilot_cont_300_bf_scaffold_6243_21
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17793..18740)
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYV6_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95629.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacil
SCNpilot_cont_300_bf_scaffold_6243_22
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18737..19417)
DNA (681bp) protein (227aa)
ABC transporter
ABC transporter Tax=GWB2_Desulfobacterales_56_26_curated
ABC transporter related id=2096212 bin=GWB2_Desulfobacterales_56_26 species=Shewanella frigidimarina genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good rbh
SCNpilot_cont_300_bf_scaffold_6243_23
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19444..20652)
DNA (1209bp) protein (403aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z6R9_9NEIS
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEG07644.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" s
RND family efflux transporter MFP subunit
SCNpilot_cont_300_bf_scaffold_6243_24
unknown

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comp(20771..20983)
DNA (213bp) protein (71aa)

This feature has no annotations

Displaying 24 items

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