ggKbase home page

SCNpilot_cont_300_bf_scaffold_6491

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_6491_1

Not on your lists

comp(2..1051)
DNA (1050bp) protein (350aa)
Peptidase S1C, Do n=2 Tax=Rhodospirillum rubrum RepID=G2TDA3_RHORU
Trypsin-like peptidase domain protein {ECO:0000313|EMBL:AIA18663.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
peptidase S1C, Do
SCNpilot_cont_300_bf_scaffold_6491_2
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1235..2110)
DNA (876bp) protein (292aa)
Protein HflC n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVY5_PARL1 rbh
HflC protein
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum la
SCNpilot_cont_300_bf_scaffold_6491_3
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2107..3282)
DNA (1176bp) protein (392aa)
HflK protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RWA4_9RHIZ
HflK protein {ECO:0000313|EMBL:ESR27300.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hflK; HflK protein
SCNpilot_cont_300_bf_scaffold_6491_4

Not on your lists

3346..4506
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVY3_PARL1 rbh
ParA/MinD ATPase like {ECO:0000313|EMBL:AIA17706.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_6491_5
unknown

Not on your lists

4519..4704
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_6491_6
unknown

Not on your lists

comp(4747..5406)
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_6491_7
Novosphingobium sp. B-7, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5718..6275
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B42440
SCNpilot_cont_300_bf_scaffold_6491_8
unknown

Not on your lists

6275..6610
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_6491_9
unknown

Not on your lists

6797..7141
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_6491_10

Not on your lists

comp(7256..8170)
DNA (915bp) protein (305aa)
SMP-30/Gluconolaconase/LRE domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVY0_PARL1 rbh
SMP-30/Gluconolaconase/LRE-like region {ECO:0000313|EMBL:AIA15429.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SMP-30/gluconolaconase/LRE domain-containing protein
SCNpilot_cont_300_bf_scaffold_6491_11

Not on your lists

comp(8252..8743)
DNA (492bp) protein (164aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
folA; dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EPD1_BRASB
SCNpilot_cont_300_bf_scaffold_6491_12
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8908..9468
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6E060
Uncharacterized protein {ECO:0000313|EMBL:EGD59002.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
SCNpilot_cont_300_bf_scaffold_6491_13
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9530..10324)
DNA (795bp) protein (265aa)
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
Thymidylate synthase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7E1_STAND
SCNpilot_cont_300_bf_scaffold_6491_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10367..10594)
DNA (228bp) protein (76aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein id=14624419 bin=bin5_DeltaP species=Candidatus Glomeribacter gigasporarum genus=Candidatus Glomeribacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Displaying 14 items

View Taxonomy