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SCNpilot_cont_300_bf_scaffold_1236

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1236_1
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..900
DNA (900bp) protein (300aa)
TonB-dependent receptor n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VHK9_CAUST
Uncharacterized protein {ECO:0000313|EMBL:KHA65177.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_1236_2
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

848..1657
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6ED99_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EHJ60698.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
phytanoyl-CoA dioxygenase
SCNpilot_cont_300_bf_scaffold_1236_3
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1696..3453
DNA (1758bp) protein (586aa)
Acetolactate synthase, large subunit n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REM0_PHEZH rbh
ilvB; acetolactate synthase, large subunit rbh
Acetolactate synthase, large subunit {ECO:0000313|EMBL:ACG78546.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="
SCNpilot_cont_300_bf_scaffold_1236_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3456..4277
DNA (822bp) protein (274aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRE2_PARL1 rbh
phytanoyl-CoA dioxygenase
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:ABS62475.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentiv
SCNpilot_cont_300_bf_scaffold_1236_5
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4293..4982)
DNA (690bp) protein (230aa)
Response regulator of potassium translocation (Two-component system with KdpD) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AUY2_AZOBR rbh
kdpE; response regulator of potassium translocation (two-component system with KdpD)
Response regulator of potassium translocation (Two-component system with KdpD) {ECO:0000313|EMBL:CCD01741.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rh
SCNpilot_cont_300_bf_scaffold_1236_6
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4979..7675)
DNA (2697bp) protein (899aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillacea
Osmosensitive K+ channel signal transduction histidine kinase (Two-component system with KdpE) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AUY1_AZOBR
kdpD; osmosensitive K+ channel signal transduction histidine kinase (two-component system with KdpE)
SCNpilot_cont_300_bf_scaffold_1236_7
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7683..8264)
DNA (582bp) protein (194aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:M
kdpC; potassium-transporting ATPase subunit KdpC (EC:3.6.3.12)
UPI0003D05198 related cluster n=1 Tax=unknown RepID=UPI0003D05198
SCNpilot_cont_300_bf_scaffold_1236_8
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8274..10352)
DNA (2079bp) protein (693aa)
kdpB; potassium-transporting ATPase B subunit (EC:3.6.3.12)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:M
Potassium-transporting ATPase B chain n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AUX9_AZOBR
SCNpilot_cont_300_bf_scaffold_1236_9
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10400..12139)
DNA (1740bp) protein (580aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275, ECO:0000313|EMBL:CCD01737.1};; ATP phosphohydrolase [potassium-transporting] A ch
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00036BA2CB rbh
kdpA; potassium translocating ATPase, subunit A
SCNpilot_cont_300_bf_scaffold_1236_10
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12148..12333)
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM59791.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_1236_11
Mycobacterium thermoresistibile, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12451..14982)
DNA (2532bp) protein (844aa)
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CB30_MYCTH rbh
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:EHI14812.1}; TaxID=1078020 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium thermoresistibi
SCNpilot_cont_300_bf_scaffold_1236_12
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14979..15932)
DNA (954bp) protein (318aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. 19-rlim RepID=G3LGX5_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPZ16232.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
SCNpilot_cont_300_bf_scaffold_1236_13
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15963..17246)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GZT3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ERF83002.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
cytochrome P450
SCNpilot_cont_300_bf_scaffold_1236_14
Pseudomonas sp. 19-rlim, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17301..18230)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036998F9
Putative uncharacterized protein {ECO:0000313|EMBL:AEO27369.1}; TaxID=1084570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomo
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1236_15
Hyphomonas chukchiensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18248..20407)
DNA (2160bp) protein (720aa)
TonB-dependent receptor n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VHK9_CAUST rbh
Uncharacterized protein {ECO:0000313|EMBL:KCZ59687.1}; TaxID=1280947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas chukchie
TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_1236_16
Mycobacterium hassiacum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20737..21315
DNA (579bp) protein (193aa)
Bacterial regulatory s, tetR family protein n=1 Tax=Mycobacterium hassiacum DSM 44199 RepID=K5BEW2_9MYCO
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:EKF22651.1}; TaxID=1122247 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1236_17
Mycobacterium thermoresistibile, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21312..22643)
DNA (1332bp) protein (444aa)
Phosphoenolpyruvate synthase n=1 Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CEQ0_MYCTH
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:EHI13542.1}; TaxID=1078020 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium thermoresistibi
pyruvate, water dikinase
Displaying 17 items

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