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SCNpilot_cont_300_bf_scaffold_1538

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1538_1
RIFOXYB1_FULL_Caulobacterales_67_16_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..638
DNA (636bp) protein (212aa)
hutH; histidine ammonia-lyase (EC:4.3.1.3); K01745 histidine ammonia-lyase [EC:4.3.1.3] Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
Histidine ammonia-lyase n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W5Z8_9CAUL
hutH; histidine ammonia-lyase
SCNpilot_cont_300_bf_scaffold_1538_2
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

635..1432
DNA (798bp) protein (266aa)
N-formylglutamate amidohydrolase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKU9_9BURK
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:EGJ08967.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA
hutG2; hypothetical protein
SCNpilot_cont_300_bf_scaffold_1538_3
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1437..2225)
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F6E1_ACIC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO33297.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain A
SCNpilot_cont_300_bf_scaffold_1538_4
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2753..4219)
DNA (1467bp) protein (489aa)
sugar transferase (EC:2.-.-.-)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QN22_METTR
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:EIG58386.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;"
SCNpilot_cont_300_bf_scaffold_1538_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4446..5102)
DNA (657bp) protein (219aa)
Acyl-homoserine-lactone synthase {ECO:0000256|RuleBase:RU361135}; EC=2.3.1.184 {ECO:0000256|RuleBase:RU361135};; Autoinducer synthesis protein {ECO:0000256|RuleBase:RU361135}; TaxID=864069 species="Ba
N-acyl-L-homoserine lactone synthetase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUR3_9RHIZ
autoinducer synthesis protein
SCNpilot_cont_300_bf_scaffold_1538_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5282..5596
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGM0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64627.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_1538_7
unknown

Not on your lists

5679..5918
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1538_8
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6114..7250
DNA (1137bp) protein (379aa)
dolichol-phosphate mannosyltransferase (EC:2.4.1.83)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PDC6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37605.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
SCNpilot_cont_300_bf_scaffold_1538_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7205..8707
DNA (1503bp) protein (501aa)
Glycosyl transferase, family 39 n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13A52_RHOPS
glycosyl transferase family protein
Glycosyl transferase, family 39 {ECO:0000313|EMBL:ABE39037.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopse
SCNpilot_cont_300_bf_scaffold_1538_10
unknown

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comp(8898..9236)
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1538_11
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9251..9559)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IGX6_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS67269.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrop
SCNpilot_cont_300_bf_scaffold_1538_12
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9639..10436)
DNA (798bp) protein (266aa)
chemotaxis protein CheY n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039BF5BD
Phyllosphere-induced regulator PhyR {ECO:0000313|EMBL:KIC58637.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brev
response regulator receiver protein
SCNpilot_cont_300_bf_scaffold_1538_13
unknown

Not on your lists

10565..10864
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1538_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10867..11502
DNA (636bp) protein (212aa)
RNA polymerase sigma70 n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A61A0A
Sigma-70 region 2 {ECO:0000313|EMBL:EKY30748.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminut
ECF subfamily RNA polymerase sigma-70 factor
SCNpilot_cont_300_bf_scaffold_1538_15
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(11572..12306)
DNA (735bp) protein (245aa)
Cell wall surface anchor family protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZUT9_OPITP
cell wall surface anchor family protein
Cell wall surface anchor family protein {ECO:0000313|EMBL:ACB74973.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitut
SCNpilot_cont_300_bf_scaffold_1538_16
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12524..13927
DNA (1404bp) protein (468aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692, ECO:0000313|EMBL:CDO59467.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacte
lpdA; dihydrolipoamide dehydrogenase (EC:1.8.1.4)
dihydrolipoamide dehydrogenase n=1 Tax=Woodsholea maritima RepID=UPI0003784C53
SCNpilot_cont_300_bf_scaffold_1538_17
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13940..14428
DNA (489bp) protein (163aa)
Acetyltransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBA0_PHEZH
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:ACG79745.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zu
SCNpilot_cont_300_bf_scaffold_1538_18
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14413..15147)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003614986
Uncharacterized protein {ECO:0000313|EMBL:EZP39387.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacter
Displaying 18 items

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