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SCNpilot_cont_300_bf_scaffold_1712

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1712_1
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..208
DNA (207bp) protein (69aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608};; TaxID=1214225 species="Bacteria; Proteo
alr2; alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z2H3_9PROT
SCNpilot_cont_300_bf_scaffold_1712_2
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

220..1476
DNA (1257bp) protein (419aa)
D-amino acid dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01202}; EC=1.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01202};; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobi
D-amino acid dehydrogenase small subunit n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JGI6_9RHIZ rbh
dadA; D-amino acid dehydrogenase small subunit
SCNpilot_cont_300_bf_scaffold_1712_3
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1944..2909
DNA (966bp) protein (322aa)
Aminotransferase class-III n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPR8_PARL1
beta alanine--pyruvate transaminase
Aminotransferase class-III {ECO:0000313|EMBL:ABS61901.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamenti
SCNpilot_cont_300_bf_scaffold_1712_4
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2916..4079)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0B1F7_9RHOO rbh
hypothetical protein
Tax=BJP_IG2103_Rhodocyclales_63_50
SCNpilot_cont_300_bf_scaffold_1712_5
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4182..6050)
DNA (1869bp) protein (623aa)
Ferrous iron transport protein B n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SWV6_CAUSK rbh
ferrous iron transport protein B
Ferrous iron transport protein B {ECO:0000313|EMBL:ABZ73164.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobact
SCNpilot_cont_300_bf_scaffold_1712_6
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6047..6325)
DNA (279bp) protein (93aa)
Fe2+ transport system protein A n=1 Tax=Caulobacter crescentus OR37 RepID=R0D3T6_CAUCE
Fe2+ transport system protein A {ECO:0000313|EMBL:ENZ83085.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobact
FeoA family protein
SCNpilot_cont_300_bf_scaffold_1712_7
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6472..7389
DNA (918bp) protein (306aa)
Methylase/methyltransferase n=1 Tax=Limnobacter sp. MED105 RepID=A6GT74_9BURK
Methylase/methyltransferase {ECO:0000313|EMBL:EDM82566.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp.
type 11 methyltransferase
SCNpilot_cont_300_bf_scaffold_1712_8
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7447..8484
DNA (1038bp) protein (346aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6C9_9BRAD
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:EFI51876.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sour
pyridoxal-5'-phosphate-dependent protein subunit beta
SCNpilot_cont_300_bf_scaffold_1712_9
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8481..9326
DNA (846bp) protein (282aa)
Rhodanese domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXG3_PARL1 rbh
rhodanese domain-containing protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans
SCNpilot_cont_300_bf_scaffold_1712_10
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9333..9854
DNA (522bp) protein (174aa)
GCN5-related N-acetyltransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXG2_PARL1
Acetyltransferase, GNAT family {ECO:0000313|EMBL:CDO61260.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter
N-acetyltransferase GCN5
SCNpilot_cont_300_bf_scaffold_1712_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10026..11468
DNA (1443bp) protein (481aa)
Amino acid/peptide transporter n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH03_NITHX rbh
amino acid/peptide transporter
Amino acid/peptide transporter {ECO:0000313|EMBL:ABE64494.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ha
SCNpilot_cont_300_bf_scaffold_1712_12
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11685..13259)
DNA (1575bp) protein (525aa)
peptidyl-dipeptidase A (EC:3.4.15.1)
Zn-dependent carboxypeptidase n=1 Tax=Caulobacter sp. AP07 RepID=J2GPH9_9CAUL
Zn-dependent carboxypeptidase {ECO:0000313|EMBL:EJL32210.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;"
SCNpilot_cont_300_bf_scaffold_1712_13
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13368..14531
DNA (1164bp) protein (388aa)
cystathionine beta-lyase (EC:4.4.1.8)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00036F527B
Cystathionine beta-lyase {ECO:0000313|EMBL:EWY41770.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella st
SCNpilot_cont_300_bf_scaffold_1712_14
Acetobacter sp. CAG:977, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14528..14872
DNA (345bp) protein (115aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Acetobacter sp. CAG:977 RepID=R5QKN8_9PROT
hisIE; phosphoribosyl-AMP pyrophosphatase/phosphoribosyl-ATP cyclohydrolase
SCNpilot_cont_300_bf_scaffold_1712_15
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14869..16179)
DNA (1311bp) protein (437aa)
FAD-linked oxidoreductase {ECO:0000313|EMBL:ABS64588.1}; EC=1.1.3.8 {ECO:0000313|EMBL:ABS64588.1};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parv
FAD-linked oxidoreductase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXF5_PARL1 rbh
FAD-linked oxidoreductase
SCNpilot_cont_300_bf_scaffold_1712_16
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16249..17094)
DNA (846bp) protein (282aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRA1_PARL1 rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:ETR75035.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
enoyl-CoA hydratase/isomerase
SCNpilot_cont_300_bf_scaffold_1712_17
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17289..17825
DNA (537bp) protein (179aa)
Bacterioferritin n=2 Tax=Bordetella holmesii RepID=M5NPJ9_9BORD
Ferritin-like protein {ECO:0000313|EMBL:KCB40865.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.
ferritin-like domain protein
SCNpilot_cont_300_bf_scaffold_1712_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17905..18768)
DNA (864bp) protein (288aa)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I7Z2_SULAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW05566.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
SCNpilot_cont_300_bf_scaffold_1712_19
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19063..19368)
DNA (306bp) protein (102aa)
Putative NADH dehydrogenase (Ubiquinone) Fe-S protein 4 n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HY04_AZOC5
NADH dehydrogenase (ubiquinone) Fe-S protein 4
Putative NADH dehydrogenase (Ubiquinone) Fe-S protein 4 {ECO:0000313|EMBL:BAF87559.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium
SCNpilot_cont_300_bf_scaffold_1712_20
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19560..20048)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HPM2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99493.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium qui
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1712_21
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20076..20612)
DNA (537bp) protein (179aa)
cold-shock protein n=1 Tax=Amorphus coralli RepID=UPI00037278A6
Cold shock protein CspB {ECO:0000313|EMBL:CDO61280.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectoca
cold-shock protein
SCNpilot_cont_300_bf_scaffold_1712_22
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20774..21418
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NSY9_9RHOB
Carbon monoxide dehydrogenase G protein {ECO:0000313|EMBL:GAN78100.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source=
carbon monoxide dehydrogenase subunit G (CoxG) family
SCNpilot_cont_300_bf_scaffold_1712_23
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21510..21986
DNA (477bp) protein (159aa)
(2Fe-2S)-binding domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXD6_PARL1
2Fe-2S iron-sulfur cluster-binding domain-containing protein
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ABS64569.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lava
SCNpilot_cont_300_bf_scaffold_1712_24
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21983..22792
DNA (810bp) protein (270aa)
Putative carbon monoxide dehydrogenase medium subunit, coxM-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J2V8_POLGS
carbon monoxide dehydrogenase medium subunit, coxM-like protein
cutM; carbon monoxide dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCNpilot_cont_300_bf_scaffold_1712_25
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22804..23112
DNA (309bp) protein (103aa)
Xanthine dehydrogenase accessory factor, putative subfamily n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IVA8_POLGS
xanthine dehydrogenase accessory factor subfamily
Xanthine dehydrogenase accessory factor, putative subfamily {ECO:0000313|EMBL:ADZ72626.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvu
Displaying 25 items

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