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SCNpilot_cont_300_bf_scaffold_1914

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1914_1
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..581)
DNA (579bp) protein (193aa)
Alpha/beta hydrolase fold protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T0Y0_META2
alpha/beta hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:CCE23414.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Me
SCNpilot_cont_300_bf_scaffold_1914_2
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(605..1213)
DNA (609bp) protein (203aa)
uracil-DNA glycosylase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039FAA65
Uracil-DNA glycosylase superfamily protein {ECO:0000313|EMBL:GAK45221.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
uracil-DNA glycosylase
SCNpilot_cont_300_bf_scaffold_1914_3
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1213..2361)
DNA (1149bp) protein (383aa)
PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1AE71
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:GAK45220.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
acyl-CoA dehydrogenase
SCNpilot_cont_300_bf_scaffold_1914_4
unknown

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comp(2444..3007)
DNA (564bp) protein (188aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1914_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3053..4087
DNA (1035bp) protein (345aa)
Luciferase family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS13_PARL1 rbh
luciferase family protein
Luciferase family protein {ECO:0000313|EMBL:ABS62696.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentiv
SCNpilot_cont_300_bf_scaffold_1914_6
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4062..5315)
DNA (1254bp) protein (418aa)
Na+ dependent nucleoside transporter domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS07_PARL1 rbh
Na+ dependent nucleoside transporter {ECO:0000313|EMBL:GAK45215.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
Na+ dependent nucleoside transporter
SCNpilot_cont_300_bf_scaffold_1914_7
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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5384..6550
DNA (1167bp) protein (389aa)
Acyltransferase 3 n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GHC1_NITSI
acyltransferase
Acyltransferase 3 {ECO:0000313|EMBL:AEJ01372.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (stra
SCNpilot_cont_300_bf_scaffold_1914_8
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6611..7522
DNA (912bp) protein (304aa)
HlyD family secretion protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGS9_PHEZH rbh
HlyD family secretion protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
HlyD family secretion protein
SCNpilot_cont_300_bf_scaffold_1914_9
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7535..8365)
DNA (831bp) protein (277aa)
enoyl-CoA hydratase n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B4EE9D rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:KIE52887.1}; TaxID=1550402 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
paaG; enoyl-CoA hydratase
SCNpilot_cont_300_bf_scaffold_1914_10
unknown

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8657..8857
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1914_11
unknown

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9068..9199
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1914_12
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9201..9812)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AFV7_AZOBR
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
conserved protein of unknown function; putative SpoV domain
SCNpilot_cont_300_bf_scaffold_1914_13
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9763..10626)
DNA (864bp) protein (288aa)
SpoVR family protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2M2D2_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
ycgB; hypothetical protein
SCNpilot_cont_300_bf_scaffold_1914_14
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10626..11522)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034CF341
sulfotransferase family protein
Sulfotransferase family protein {ECO:0000313|EMBL:AGL01031.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibso
SCNpilot_cont_300_bf_scaffold_1914_15
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11568..12881)
DNA (1314bp) protein (438aa)
Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TCK9_PARBH rbh
hypothetical protein; K09786 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1914_16
Parvularcula bermudensis, Parvularcula, Parvularculales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12942..14885)
DNA (1944bp) protein (648aa)
Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TET7_PARBH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADM09509.1}; TaxID=314260 species="Bacteria; Proteobacteria; Alphaproteobacteria; Parvularculales; Parvularculaceae; Parvularcula.;" source="Parvularcula berm
SCNpilot_cont_300_bf_scaffold_1914_17
unknown

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15559..15702
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 17 items

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