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SCNpilot_cont_300_bf_scaffold_1977

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1977_1
unknown

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comp(3..98)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1977_2
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(113..712)
DNA (600bp) protein (200aa)
DSBA oxidoreductase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWH7_PARL1
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:ABS64260.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans
SCNpilot_cont_300_bf_scaffold_1977_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1100..3064
DNA (1965bp) protein (655aa)
Oligopeptide transporter, OPT family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPA9_9GAMM
oligopeptide transporter, OPT family
Oligopeptide transporter, OPT family {ECO:0000313|EMBL:AHG88509.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
SCNpilot_cont_300_bf_scaffold_1977_4
Mycobacterium phlei, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3047..3925)
DNA (879bp) protein (293aa)
HpcH/HpaI aldolase/citrate lyase family protein n=1 Tax=Mycobacterium hassiacum DSM 44199 RepID=K5BIH0_9MYCO
Citryl-CoA lyase {ECO:0000313|EMBL:EID16471.1}; TaxID=1150599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM601174.;"
HpcH/HpaI aldolase/citrate lyase family
SCNpilot_cont_300_bf_scaffold_1977_5
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3922..4380)
DNA (459bp) protein (153aa)
MaoC family dehydratase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QZ22_9BURK
MaoC family dehydratase {ECO:0000313|EMBL:ETF04269.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
dehydratase, MaoC family protein
SCNpilot_cont_300_bf_scaffold_1977_6
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4526..5140)
DNA (615bp) protein (205aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibac
Carbonic anhydrase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RAC8_9RHIZ
carbonate dehydratase
SCNpilot_cont_300_bf_scaffold_1977_7
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5187..5711)
DNA (525bp) protein (175aa)
Acetyltransferase, ribosomal protein N-acetylase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZD0_9RHIZ
Acetyltransferase, ribosomal protein N-acetylase {ECO:0000313|EMBL:EIM29322.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" sou
acetyltransferase
SCNpilot_cont_300_bf_scaffold_1977_8
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5718..6884)
DNA (1167bp) protein (389aa)
acyl-CoA dehydrogenase n=1 Tax=Paracoccus sp. N5 RepID=UPI0003618633 rbh
CaiA protein {ECO:0000313|EMBL:BAQ49908.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticu
Acyl-CoA dehydrogenase, C-terminal domain protein rbh
SCNpilot_cont_300_bf_scaffold_1977_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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7141..8985
DNA (1845bp) protein (615aa)
glutamate synthase n=1 Tax=Elioraea tepidiphila RepID=UPI00035C7FE1 rbh
putative glutamate synthase small subunit Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
glutamate synthase (NADPH) small chain
SCNpilot_cont_300_bf_scaffold_1977_10

Not on your lists

comp(8982..9713)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YAQ8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD34447.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_300_bf_scaffold_1977_11
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9857..10747
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035EC1DA
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:ABQ69582.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sp
SCNpilot_cont_300_bf_scaffold_1977_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10744..11799
DNA (1056bp) protein (352aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=mine drainage metagenome RepID=T0YFS0_9ZZZZ
2-oxoglutarate ferredoxin oxidoreductase subunit beta
SCNpilot_cont_300_bf_scaffold_1977_13
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11991..12575
DNA (585bp) protein (195aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y7V3_THEBD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADG87772.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (st
SCNpilot_cont_300_bf_scaffold_1977_14
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12577..13197
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INZ2_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI99412.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillu
SCNpilot_cont_300_bf_scaffold_1977_15
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13315..13596)
DNA (282bp) protein (94aa)
L-lysine 2,3-aminomutase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PXH4_9RHIZ
L-lysine 2,3-aminomutase {ECO:0000313|EMBL:EKF57425.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
Displaying 15 items

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