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SCNpilot_cont_300_bf_scaffold_2171

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2171_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1162)
DNA (1161bp) protein (387aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JWG4_HYPDA
SCNpilot_cont_300_bf_scaffold_2171_2
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1958..2344
DNA (387bp) protein (129aa)
membrane protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000364FD3A
Uncharacterized protein {ECO:0000313|EMBL:GAO40175.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2171_3
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2367..4988
DNA (2622bp) protein (874aa)
Peptidase M24 n=1 Tax=Oceanibaculum indicum P24 RepID=K2IZS1_9PROT rbh
Peptidase M24 {ECO:0000313|EMBL:EKE68393.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P
peptidase M24
SCNpilot_cont_300_bf_scaffold_2171_4
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4988..5998
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWQ7_RHOCS
Enterochelin esterase {ECO:0000313|EMBL:KGM35115.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2171_5
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5995..8160)
DNA (2166bp) protein (722aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC
NAD-dependent DNA ligase (EC:6.5.1.2)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000375C0ED
SCNpilot_cont_300_bf_scaffold_2171_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8157..9839)
DNA (1683bp) protein (561aa)
DNA repair protein RecN n=1 Tax=Oceanibaculum indicum P24 RepID=K2IEC2_9PROT
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales
DNA repair protein RecN
SCNpilot_cont_300_bf_scaffold_2171_7
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9849..10706)
DNA (858bp) protein (286aa)
Outer membrane protein assembly factor BamD n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TVQ4_TISMK
DNA uptake lipoprotein
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillac
SCNpilot_cont_300_bf_scaffold_2171_8
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10813..11670)
DNA (858bp) protein (286aa)
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS0004138
UDP-3-0-acyl N-acetylglucosamine deacetylase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRF5_RHOCS
SCNpilot_cont_300_bf_scaffold_2171_9
unknown

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comp(11755..11943)
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying 9 items

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