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SCNpilot_cont_300_bf_scaffold_2221

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2221_1
Pseudoalteromonas atlantica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..814)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039A4FEB
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ABG38907.1}; Flags: Precursor;; TaxID=342610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromona
SCNpilot_cont_300_bf_scaffold_2221_2
Mycobacterium indicus pranii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(993..4160)
DNA (3168bp) protein (1056aa)
PEP-utilizing protein n=1 Tax=Mycobacterium indicus pranii MTCC 9506 RepID=J9W5T3_9MYCO rbh
PEP-utilizing protein
PEP-utilizing protein {ECO:0000313|EMBL:AFS12205.1}; TaxID=1232724 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="M
SCNpilot_cont_300_bf_scaffold_2221_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4165..4998)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI0003607C5A
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:EYF08682.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Cho
pyruvate phosphate dikinase, PEP/pyruvate-binding domain protein
SCNpilot_cont_300_bf_scaffold_2221_4
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5023..6027)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E5J9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KCZ92144.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsoni
SCNpilot_cont_300_bf_scaffold_2221_5
Hyphomonas chukchiensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6225..6698
DNA (474bp) protein (158aa)
AsnC family transcriptional regulator n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RWD4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KCZ57433.1}; TaxID=1280947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas chukchie
AsnC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2221_6
Hyphomonas chukchiensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6695..7150
DNA (456bp) protein (152aa)
Transcriptional regulator, AsnC family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9Z7_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:KCZ57432.1}; TaxID=1280947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas chukchie
transcriptional regulator, AsnC family
SCNpilot_cont_300_bf_scaffold_2221_7

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comp(7173..7919)
DNA (747bp) protein (249aa)
Nitroreductase family protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXI5_HYPNA rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN99089.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
nitroreductase family protein
SCNpilot_cont_300_bf_scaffold_2221_8
unknown

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8109..8345
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2221_9
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8342..10111
DNA (1770bp) protein (590aa)
AsmA family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQJ2_PARL1
AsmA family protein
AsmA family protein {ECO:0000313|EMBL:ABS62175.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibacul
SCNpilot_cont_300_bf_scaffold_2221_10

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10108..11226
DNA (1119bp) protein (373aa)
Spermidine/putrescine-binding periplasmic protein n=1 Tax=uncultured bacterium BLR7 RepID=C0INQ7_9BACT rbh
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:ACN58943.1}; TaxID=506523 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR7.;"
polyamine/opine ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_2221_11

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11471..12415
DNA (945bp) protein (315aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=uncultured bacterium BLR7 RepID=C0INQ8_9BACT rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACN58944.1}; TaxID=506523 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR7.;"
oligopeptide transporter permease protein
SCNpilot_cont_300_bf_scaffold_2221_12

Not on your lists

12415..13362
DNA (948bp) protein (316aa)
ABC-type dipeptide/oligopeptide/nickel transport system n=1 Tax=uncultured bacterium BLR7 RepID=C0INQ9_9BACT rbh
ABC-type dipeptide/oligopeptide/nickel transport system {ECO:0000313|EMBL:ACN58945.1}; TaxID=506523 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR7.;"
dipeptide/oligopeptide/nickel ABC transporter permease
SCNpilot_cont_300_bf_scaffold_2221_13

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13302..14837
DNA (1536bp) protein (512aa)
Oligopeptide transport system permease protein oppB n=1 Tax=uncultured bacterium BLR7 RepID=C0INR0_9BACT rbh
Oligopeptide transport system permease protein oppB {ECO:0000313|EMBL:ACN58946.1}; TaxID=506523 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR7.;"
oligopeptide/dipeptide ABC transporter ATPase
Displaying 13 items

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