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SCNpilot_cont_300_bf_scaffold_2268

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2268_1
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..226
DNA (225bp) protein (75aa)
Aminoglycoside phosphotransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQT9_PARL1
fadE36; aminoglycoside phosphotransferase; K06979 Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
aminoglycoside phosphotransferase
SCNpilot_cont_300_bf_scaffold_2268_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(427..645)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG07_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39684.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2268_3
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

859..1488
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003817379
hypothetical protein
Methyltransferase type 11 {ECO:0000313|EMBL:KHL25861.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter
SCNpilot_cont_300_bf_scaffold_2268_4
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1475..2467)
DNA (993bp) protein (331aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T5K7_CAUSK
alcohol dehydrogenase; K07119 Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
alcohol dehydrogenase
SCNpilot_cont_300_bf_scaffold_2268_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2492..3697)
DNA (1206bp) protein (402aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q7G1_RHOPT
L-carnitine dehydratase/bile acid-inducible protein F
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:CAE27020.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomon
SCNpilot_cont_300_bf_scaffold_2268_6
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3910..5148)
DNA (1239bp) protein (413aa)
3-ketoacyl-CoA thiolase (EC:2.3.1.9)
3-ketoacyl-CoA thiolase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GYD6_CAUCN rbh
Thiolase family protein {ECO:0000313|EMBL:AAK22252.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cresce
SCNpilot_cont_300_bf_scaffold_2268_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5265..6716)
DNA (1452bp) protein (484aa)
glutamate synthase (NADH) small subunit (EC:1.4.1.14); K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
glutamate synthase (NADH) small subunit (EC:1.4.1.14)
dihydropyrimidine dehydrogenase subunit A n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A94006
SCNpilot_cont_300_bf_scaffold_2268_8
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6765..8591)
DNA (1827bp) protein (609aa)
glutamate synthase (NADH) large subunit (EC:1.4.1.14)
Glutamate synthase (NADH) large subunit {ECO:0000313|EMBL:ABQ66636.1}; EC=1.4.1.14 {ECO:0000313|EMBL:ABQ66636.1};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales
Glutamate synthase (NADH) large subunit n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V2X0_SPHWW
SCNpilot_cont_300_bf_scaffold_2268_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9006..11324)
DNA (2319bp) protein (773aa)
glutamate synthase (NADH) large subunit (EC:1.4.1.14); K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
glutamate synthase (NADH) large subunit (EC:1.4.1.14)
glutamate synthase n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B5855E
SCNpilot_cont_300_bf_scaffold_2268_10
unknown

Not on your lists

comp(11562..12005)
DNA (444bp) protein (148aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2268_11
Hyphomonas sp. T16B2, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12014..12565)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C3P0_HYPNA
Uncharacterized protein {ECO:0000313|EMBL:KCZ52701.1}; TaxID=1280941 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. T16B
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2268_12
Fonsecaea pedrosoi, Fonsecaea, Chaetothyriales, Chaetothyriomycetidae, Ascomycota, Fungi

Not on your lists

comp(12562..13428)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Mycosphaerella graminicola (strain CBS 115943 / IPO323) RepID=F9X0G0_MYCGM rbh
Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence {ECO:0000313|EMBL:KIW81672.1}; TaxID=1442368 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaet
phytanoyl-CoA dioxygenase
SCNpilot_cont_300_bf_scaffold_2268_13
unknown

Not on your lists

comp(13535..13714)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2268_14
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13994..14806
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6ED99_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ60698.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
phytanoyl-CoA dioxygenase
SCNpilot_cont_300_bf_scaffold_2268_15
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14972..16009
DNA (1038bp) protein (346aa)
bcsA; chalcone synthase (EC:2.3.1.74) Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
bcsA; chalcone synthase (EC:2.3.1.74)
Terpene family molecule synthase n=1 Tax=mine drainage metagenome RepID=E6PED6_9ZZZZ rbh
SCNpilot_cont_300_bf_scaffold_2268_16
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16009..16527
DNA (519bp) protein (173aa)
Isoprenylcysteine carboxyl methyltransferase (ICMT) family n=2 Tax=Rhodospirillum centenum RepID=B6IT05_RHOCS
Isoprenylcysteine carboxyl methyltransferase (ICMT) family
Uncharacterized protein {ECO:0000313|EMBL:AAD43970.1}; TaxID=34018 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum
SCNpilot_cont_300_bf_scaffold_2268_17
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16524..17546
DNA (1023bp) protein (341aa)
multidrug ABC transporter n=1 Tax=Rhizobium leguminosarum RepID=UPI000376E0AB
multidrug ABC transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EJC78208.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
SCNpilot_cont_300_bf_scaffold_2268_18
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17561..18040
DNA (480bp) protein (160aa)
Multidrug efflux pump, MF Superfamily protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U0P6_9PROT
Multidrug efflux pump, MF Superfamily protein {ECO:0000313|EMBL:EDP62061.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
EmrB/QacA subfamily drug resistance transporter
SCNpilot_cont_300_bf_scaffold_2268_19
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18156..19970
DNA (1815bp) protein (605aa)
Putative monooxygenase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCQ6_PHEZH
monooxygenase
Putative monooxygenase {ECO:0000313|EMBL:ACG78243.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacteri
SCNpilot_cont_300_bf_scaffold_2268_20
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20273..21157
DNA (885bp) protein (295aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Caulobacter sp. AP07 RepID=J2FW70_9CAUL
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:EJL21435.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;
beta-lactamase
SCNpilot_cont_300_bf_scaffold_2268_21
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21187..22434
DNA (1248bp) protein (416aa)
Monooxygenase FAD-binding n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ09_PARL1 rbh
FAD-binding monooxygenase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
FAD-binding monooxygenase
SCNpilot_cont_300_bf_scaffold_2268_22
Hyphomonas adhaerens, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22431..22685
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C3I0_HYPNA
Uncharacterized protein {ECO:0000313|EMBL:KCZ83121.1}; TaxID=1280949 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas adhaeren
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2268_23
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22747..23502
DNA (756bp) protein (252aa)
Aminoglycoside phosphotransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ07_PARL1
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ABS61990.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum la
Displaying 23 items

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