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SCNpilot_cont_300_bf_scaffold_2300

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2300_1
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..293)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5FC52_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV09506.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium met
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2300_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(348..797)
DNA (450bp) protein (150aa)
molybdopterin synthase subunit MoaE; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=GWE1_Thiobacillus_62_9_curated
molybdopterin synthase subunit MoaE
Molybdenum cofactor biosynthesis protein E id=1324283 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
SCNpilot_cont_300_bf_scaffold_2300_3
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(794..1045)
DNA (252bp) protein (84aa)
Molybdopterin converting factor, subunit 1 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVF5_PARL1
molybdopterin converting factor subunit 1
Molybdopterin synthase sulfur carrier subunit {ECO:0000256|RuleBase:RU362014}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="P
SCNpilot_cont_300_bf_scaffold_2300_4
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1042..1677)
DNA (636bp) protein (212aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EFO31776.1}; EC=2.7.8.5 {ECO:0000313|EMBL:EFO31776.1};; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteo
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CIG4_9RHOB
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
SCNpilot_cont_300_bf_scaffold_2300_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1711..2328)
DNA (618bp) protein (206aa)
UvrABC system protein C n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVF7_PARL1
excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
SCNpilot_cont_300_bf_scaffold_2300_6
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2325..3548)
DNA (1224bp) protein (408aa)
UvrABC system protein C n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVF7_PARL1
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit C
SCNpilot_cont_300_bf_scaffold_2300_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3598..4671
DNA (1074bp) protein (358aa)
Beta-lactamase-like (EC:3.1.2.6); K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Beta-lactamase domain protein n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TEQ2_BURPP rbh
beta-lactamase domain-containing protein
SCNpilot_cont_300_bf_scaffold_2300_8
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4672..5064)
DNA (393bp) protein (131aa)
Dihydroneopterin aldolase family n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SLI8_RHOPH
Dihydroneopterin aldolase {ECO:0000313|EMBL:GAK33581.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
Dihydroneopterin aldolase family
SCNpilot_cont_300_bf_scaffold_2300_9
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5069..5830)
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B4F8_PARDP
Short-chain dehydrogenase {ECO:0000313|EMBL:KGJ07528.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutu
short chain dehydrogenase
SCNpilot_cont_300_bf_scaffold_2300_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5832..6812)
DNA (981bp) protein (327aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WT28_9BRAD
SCNpilot_cont_300_bf_scaffold_2300_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6877..9630)
DNA (2754bp) protein (918aa)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HZ67_PARL1
PII uridylyl-transferase
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII
SCNpilot_cont_300_bf_scaffold_2300_12
Arcobacter sp. L, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9697..10398)
DNA (702bp) protein (234aa)
Aquaporin Z n=1 Tax=Arcobacter sp. L RepID=G2HXP9_9PROT
aquaporin
Aquaporin Z {ECO:0000256|HAMAP-Rule:MF_01146}; TaxID=944547 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter sp. L.;"
SCNpilot_cont_300_bf_scaffold_2300_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10543..11526
DNA (984bp) protein (328aa)
adh5; alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase {ECO:0000313|EMBL:CAN95063.1}; EC=1.1.1.1 {ECO:0000313|EMBL:CAN95063.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyang
Alcohol dehydrogenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FJZ5_SORC5 rbh
SCNpilot_cont_300_bf_scaffold_2300_14
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11516..11899)
DNA (384bp) protein (128aa)
CutA1 divalent ion tolerance protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWM7_PARL1
CutA1 divalent ion tolerance protein
CutA1 divalent ion tolerance protein {ECO:0000313|EMBL:ABS64310.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum
SCNpilot_cont_300_bf_scaffold_2300_15
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11935..12141)
DNA (207bp) protein (69aa)
cold-shock protein n=1 Tax=Woodsholea maritima RepID=UPI00037601D4
cspA4; Cold shock protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AEG04566.1}; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorh
SCNpilot_cont_300_bf_scaffold_2300_16
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12358..12972)
DNA (615bp) protein (205aa)
Glutathione S-transferase domain n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVH7_PARL1
glutathione S-transferase domain-containing protein
Glutathione S-transferase domain {ECO:0000313|EMBL:ABS63910.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lav
SCNpilot_cont_300_bf_scaffold_2300_17
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13054..13599)
DNA (546bp) protein (182aa)
Cu/Zn superoxide dismutase {ECO:0000313|EMBL:CCA92322.1}; EC=1.15.1.1 {ECO:0000313|EMBL:CCA92322.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003604C5B
CRISPR-associated protein Csn1
SCNpilot_cont_300_bf_scaffold_2300_18
unknown

Not on your lists

13760..14311
DNA (552bp) protein (184aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2300_19
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14315..14869)
DNA (555bp) protein (185aa)
Beta-lactamase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHF5_PHEZH
beta-lactamase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
beta-lactamase
SCNpilot_cont_300_bf_scaffold_2300_20
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14866..15516)
DNA (651bp) protein (217aa)
Beta-lactamase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHF5_PHEZH
beta-lactamase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
beta-lactamase
SCNpilot_cont_300_bf_scaffold_2300_21
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15596..15931)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003786842
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ29969.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" sourc
Displaying 21 items

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